Jatropha Genome Database

JcCB0304921.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0304921.10 + phase: 2 /partial
         (92 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29661.m000937 transferase, putative                                   177   8e-46
30169.m006367 transferase, putative                                    95   9e-21
30138.m004039 Xyloglucan 6-xylosyltransferase, putative                64   1e-11
29726.m004041 Xyloglucan 6-xylosyltransferase, putative                58   8e-10

>29661.m000937 transferase, putative
          Length = 446

 Score =  177 bits (449), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 78/87 (89%), Positives = 84/87 (96%)

Query: 6   REPHLREAGNGKGSWRRPFITHFTGCQPCSGDHNKMYEGDSCWKGMVKALNFADNQVLRK 65
           REPHL+ AGNGKGSWRRPFITHFTGCQPCSG+HNKMYEGD+CW GMV+ALNFADNQVLRK
Sbjct: 360 REPHLKAAGNGKGSWRRPFITHFTGCQPCSGEHNKMYEGDACWDGMVRALNFADNQVLRK 419

Query: 66  YGFVHPDLLDSKTVVETPFDYPEEGPW 92
           YGFVHPDLL+S TVVETPFDYP+EGPW
Sbjct: 420 YGFVHPDLLNSNTVVETPFDYPDEGPW 446


>30169.m006367 transferase, putative
          Length = 424

 Score = 94.7 bits (234), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 41/59 (69%), Positives = 48/59 (81%)

Query: 21  RRPFITHFTGCQPCSGDHNKMYEGDSCWKGMVKALNFADNQVLRKYGFVHPDLLDSKTV 79
           RRP ITHFTGC+PCSG+HN  Y  DSC+ GM KALNFADNQVL  YGF+H +L+DS +V
Sbjct: 361 RRPLITHFTGCEPCSGNHNPAYSWDSCFNGMRKALNFADNQVLLNYGFLHQNLVDSSSV 419


>30138.m004039 Xyloglucan 6-xylosyltransferase, putative
          Length = 454

 Score = 63.9 bits (154), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 11/81 (13%)

Query: 16  GKGSWRRPFITHFTGCQPCS--GDHNKMYEGDSCWKGMVKALNFADNQVLRKYGFVHPDL 73
           G G  R PF+THF GC+PC   GD    Y  + C K M +A NFADNQVL+ YGF H  L
Sbjct: 366 GLGDERWPFVTHFVGCKPCGSYGD----YPVERCLKSMERAFNFADNQVLKLYGFGHRGL 421

Query: 74  LDSKTV-----VETPFDYPEE 89
           L  K         TP +Y ++
Sbjct: 422 LSPKIKRIRNETVTPLEYVDQ 442


>29726.m004041 Xyloglucan 6-xylosyltransferase, putative
          Length = 461

 Score = 58.2 bits (139), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 16  GKGSWRRPFITHFTGCQPCS--GDHNKMYEGDSCWKGMVKALNFADNQVLRKYGFVHPDL 73
           G G  R P +THF GC+PC   GD    Y  + C K M +A NF DNQ+L+ YGF H  L
Sbjct: 368 GLGDHRWPLVTHFVGCKPCGKFGD----YPVERCLKQMDRAFNFGDNQILQMYGFTHKSL 423

Query: 74  LDSKT 78
              + 
Sbjct: 424 ASRRV 428