Jatropha Genome Database

JcCB0302671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0302671.10 - phase: 0 /pseudo/partial
         (197 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29757.m000730 aspartate kinase, putative                              212   7e-56

>29757.m000730 aspartate kinase, putative
          Length = 920

 Score =  212 bits (540), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 106/148 (71%), Positives = 119/148 (80%)

Query: 50  RIGFVSQWGRRESACIYVSSSVKAVLLDESKEKAYLSKGGMWSVHKFGGTCVGSSERIKN 109
           R   +SQ GRRESAC +VSSS+KAVLLDESKEK  L KG MWSVHKFGGTCVG+S+RIKN
Sbjct: 50  RTALLSQCGRRESACGHVSSSIKAVLLDESKEKVRLPKGNMWSVHKFGGTCVGTSDRIKN 109

Query: 110 VAEIIVNDGSEGKLVVVSALSKVTDMLYDLIYKAQSRDDSYIAAADAVFEKHKXXXXXXX 169
           VAEII+ND S+GKLVVVSA+SKVTDM+YDLI+KAQSRDDSYIAA DAVFEKH+       
Sbjct: 110 VAEIIINDVSQGKLVVVSAMSKVTDMMYDLIHKAQSRDDSYIAAVDAVFEKHRSTAMDLL 169

Query: 170 XXXXXXXXXXQLQHDVNNLKAMLRAIFI 197
                     +L HDVNNLKAMLRAI+I
Sbjct: 170 DGDDLASFLSRLHHDVNNLKAMLRAIYI 197