Jatropha Genome Database

JcCB0298051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0298051.10 + phase: 1 /partial
         (129 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29700.m000771 4-hydroxybenzoate octaprenyltransferase, putative       202   3e-53

>29700.m000771 4-hydroxybenzoate octaprenyltransferase, putative
          Length = 387

 Score =  202 bits (515), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 96/108 (88%), Positives = 102/108 (94%)

Query: 1   SLDLAVVLPLYVAGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSTKEWITGFGIAC 60
           SLD AVVLPLY++GVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSTKEWITGFGIAC
Sbjct: 279 SLDPAVVLPLYMSGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSTKEWITGFGIAC 338

Query: 61  ISSLALSGVSADLGWPFYAFLAAASGHLTWQIWTVDLSSRADCNKKYV 108
           I SLALSGV+A++GWPFYAFL A SGHL WQIWTVDLS R+DCNKKYV
Sbjct: 339 IGSLALSGVNANIGWPFYAFLTAGSGHLAWQIWTVDLSCRSDCNKKYV 386