Jatropha Genome Database

JcCB0295761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0295761.10 - phase: 2 /partial
         (172 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30106.m000666 aminobutyrate aminotransferase, putative                226   3e-60
30015.m000215 alanine-glyoxylate aminotransferase, putative            51   3e-07
29693.m001974 ornithine aminotransferase, putative                     48   2e-06
27446.m000476 acetylornithine aminotransferase, putative               48   2e-06

>30106.m000666 aminobutyrate aminotransferase, putative
          Length = 528

 Score =  226 bits (577), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 105/124 (84%), Positives = 116/124 (93%), Gaps = 1/124 (0%)

Query: 12  GSFSHGFTYSGHPVSCAVAIEALKIYKYGENIPEQVSKIAPKFQDGLKAFSDSPIIGEIR 71
           G FSHGFTYSGHPVSCAVAIEALKIYK   NI E+V+++AP+FQDGLKAFSDSP+IGEIR
Sbjct: 381 GIFSHGFTYSGHPVSCAVAIEALKIYKE-RNIAERVNEVAPRFQDGLKAFSDSPVIGEIR 439

Query: 72  GTGLILGTEFTDNKSPNDPFPPEWGVGAYFGAQCEKHGMLVRVAGDNIMMSPPLTISPEE 131
           GTGLILGTEF DNKSPNDPFP EWG+GAYFGAQC+KHGMLVRVAGDNIMMSPPL I+PEE
Sbjct: 440 GTGLILGTEFADNKSPNDPFPAEWGIGAYFGAQCQKHGMLVRVAGDNIMMSPPLIITPEE 499

Query: 132 VDEV 135
           VD++
Sbjct: 500 VDKL 503


>30015.m000215 alanine-glyoxylate aminotransferase, putative
          Length = 480

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 8/119 (6%)

Query: 19  TYSGHPVSCAVAIEALKIYKYGENIPEQVSKIAPKFQDGLKAFSDS-PIIGEIRGTGLIL 77
           T+ G+PV  A  +  L++ +  EN+ E  S +    ++ L    D   IIG++RG GL+L
Sbjct: 353 TFGGNPVCTAAGLAVLRVIEK-ENLQENASIVGSHLKNRLNELKDKYEIIGDVRGKGLML 411

Query: 78  GTEFTDNKSPNDPFPPEWGVGAYFGAQCEKHGMLVRVA---GDNIMMSPPLTISPEEVD 133
           G E   ++    P   E     +   Q ++ G+LV      G+   ++PPL  + ++ D
Sbjct: 412 GVELVTDRQQKTPAKAET---LHIMDQMKEIGVLVGKGGFYGNVFRITPPLCFTKQDAD 467


>29693.m001974 ornithine aminotransferase, putative
          Length = 473

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 29/131 (22%)

Query: 16  HGFTYSGHPVSCAVAIEALKIY----------KYGENIPEQVSKIAPKFQDGLKAFSDSP 65
           HG T+ G+P++ AVA+ +L +           + GE + +Q+ K+  +F D +K      
Sbjct: 316 HGSTFGGNPLASAVAVASLDVVIDEGLAERSAQLGEELRDQLLKVQQQFPDYIK------ 369

Query: 66  IIGEIRGTGLILGTEFTDNKSPNDPFPPEWGVGAY-FGAQCEKHGMLVRVAGDNIM-MSP 123
              E+RG GL    EF D+K+      P   + AY    + ++ G+L +   D I+ ++P
Sbjct: 370 ---EVRGRGLFNAVEF-DSKA----LSP---ISAYDICLKLKERGILAKPTHDTIVRLTP 418

Query: 124 PLTISPEEVDE 134
           PL++S +E+ E
Sbjct: 419 PLSMSLDELQE 429


>27446.m000476 acetylornithine aminotransferase, putative
          Length = 154

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 19/123 (15%)

Query: 16  HGFTYSGHPVSCAVAIEAL-KIYKYGENIPEQVSKIAPKFQDGL-KAFSDSPIIGEIRGT 73
           HG T++G P+ C  AI  L KI   G      VSK    F++ L +    +  + E+RG 
Sbjct: 31  HGSTFAGGPLVCNAAITVLDKISSPG--FLASVSKKGQYFKEMLIQKLGGNSHVREVRGL 88

Query: 74  GLILGTEFTDNKSPNDPFPPEWGVGAYFGAQCEKHGMLVRVAGDN--IMMSPPLTISPEE 131
           GLI+G E   + SP   F             C   G+L+  AG    + + PPL IS +E
Sbjct: 89  GLIIGIELDVSASPLVDF-------------CRNSGLLILTAGKGNVVRLVPPLIISEQE 135

Query: 132 VDE 134
           ++ 
Sbjct: 136 LEH 138