Jatropha Genome Database
- JcCB0294021.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0294021.10 - phase: 0
(113 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29907.m000663 mads box protein, putative 126 3e-30
30174.m008934 mads box protein, putative 94 2e-20
30138.m003939 mads box protein, putative 91 2e-19
29596.m000699 mads box protein, putative 89 5e-19
30147.m014133 mads box protein, putative 89 6e-19
29804.m001536 mads box protein, putative 87 2e-18
29648.m001978 mads box protein, putative 82 5e-17
30221.m002218 mads box protein, putative 82 6e-17
29838.m001690 mads box protein, putative 82 7e-17
29782.m000119 Floral homeotic protein DEFICIENS, putative 79 5e-16
30170.m013776 mads box protein, putative 74 1e-14
29908.m005982 mads box protein, putative 74 2e-14
30138.m004061 mads box protein, putative 69 5e-13
29693.m002042 mads box protein, putative 67 2e-12
29693.m002039 mads box protein, putative 65 8e-12
28348.m000077 mads box protein, putative 64 1e-11
29813.m001508 mads box protein, putative 63 3e-11
30099.m001672 mads box protein, putative 62 4e-11
29693.m002041 mads box protein, putative 59 4e-10
29613.m000367 mads box protein, putative 58 1e-09
30099.m001671 mads box protein, putative 57 2e-09
27866.m000233 mads box protein, putative 57 2e-09
28830.m000229 mads box protein, putative 56 3e-09
29739.m003627 mads box protein, putative 56 5e-09
29838.m001672 mads box protein, putative 53 3e-08
27893.m000228 mads box protein, putative 50 2e-07
29912.m005524 mads box protein, putative 50 2e-07
28180.m000391 mads box protein, putative 46 4e-06
30190.m010925 conserved hypothetical protein 45 7e-06
>29907.m000663 mads box protein, putative
Length = 205
Score = 126 bits (316), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/66 (89%), Positives = 62/66 (93%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLYELATK 60
MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIG+ IFSAHGKLY+LATK
Sbjct: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGLFIFSAHGKLYDLATK 60
Query: 61 GYVLSL 66
G + L
Sbjct: 61 GTMSGL 66
>30174.m008934 mads box protein, putative
Length = 244
Score = 93.6 bits (231), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLYELATK 60
M RG+V++KRIEN ++RQVTF KRR+GLLKKA ELSVLCDAE+ ++IFS+ GKLYE
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGNA 60
Query: 61 GYVLSLS-HKKC 71
G +L +++C
Sbjct: 61 GTTKTLERYQRC 72
>30138.m003939 mads box protein, putative
Length = 244
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 51/59 (86%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLYELAT 59
M RG+VQ+KRIEN ++RQVTF KRR+GLLKKA E+SVLCDAE+ +++FS GKL+E +T
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59
>29596.m000699 mads box protein, putative
Length = 262
Score = 89.0 bits (219), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 57/75 (76%), Gaps = 6/75 (8%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLYELATK 60
M RGK+ ++RI+N RQVTF KRR+GLLKKAKEL++LCDAE+G++IFS+ GKLY+ +
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFSSTGKLYDFS-- 58
Query: 61 GYVLSLSHKKCIQRF 75
S S K I+R+
Sbjct: 59 ----SSSMKSIIERY 69
>30147.m014133 mads box protein, putative
Length = 213
Score = 88.6 bits (218), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 54/75 (72%), Gaps = 6/75 (8%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLYELATK 60
M RGK+QM+RIEN RQVTF KRR+GLLKKA ELSVLCDAE+ ++IFS G+L E A+
Sbjct: 1 MVRGKIQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLSEFASN 60
Query: 61 GYVLSLSHKKCIQRF 75
+K I+R+
Sbjct: 61 EM------QKTIERY 69
>29804.m001536 mads box protein, putative
Length = 266
Score = 87.0 bits (214), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 55/75 (73%), Gaps = 6/75 (8%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLYELATK 60
M RGK+ ++RI+N RQVTF KRR+GLLKKA+ELS+LCDAE+G++IFS+ KLY+ A
Sbjct: 28 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGVIIFSSTSKLYDYA-- 85
Query: 61 GYVLSLSHKKCIQRF 75
S S I+R+
Sbjct: 86 ----STSMNSVIERY 96
>29648.m001978 mads box protein, putative
Length = 234
Score = 82.0 bits (201), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 52/64 (81%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLYELATK 60
M RG++++KRIEN +RQVT+ KRR+G++KKAKE++VLCDAE+ ++IF++ GK++E +
Sbjct: 1 MGRGRIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAEVSLIIFASSGKMHEYCSP 60
Query: 61 GYVL 64
L
Sbjct: 61 STTL 64
>30221.m002218 mads box protein, putative
Length = 233
Score = 81.6 bits (200), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 55/75 (73%), Gaps = 4/75 (5%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLYELATK 60
M RGK+ +KRIEN RQVTF KRR+GLLKK ELSVLCDA+IG++IFS+ GK+ + T+
Sbjct: 1 MGRGKIPIKRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKMCQYCTE 60
Query: 61 GYVLSLSHKKCIQRF 75
L ++ I+R+
Sbjct: 61 ----PLRMEQIIERY 71
>29838.m001690 mads box protein, putative
Length = 61
Score = 81.6 bits (200), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 46/59 (77%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLYELAT 59
M R K+Q+K+I+N RQVTF KRR GL KKA ELS LCDAEI +L+FSA GKL+E A+
Sbjct: 1 MTRQKIQIKKIDNITARQVTFSKRRRGLFKKAYELSTLCDAEIALLVFSATGKLFEYAS 59
>29782.m000119 Floral homeotic protein DEFICIENS, putative
Length = 235
Score = 79.0 bits (193), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 61/89 (68%), Gaps = 5/89 (5%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHG-KLYELAT 59
M RGK+++K+IENP +RQVT+ KRR+G+ KKA+EL+VLCDA++ +++FS G K +E +
Sbjct: 1 MGRGKIEIKKIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNSGRKFHEFIS 60
Query: 60 KGYVLSLSHKKCIQRFFFSIKVHIYILSF 88
G KK ++ ++ + ++I +
Sbjct: 61 PGTTT----KKIFDQYQKTLGIDLWITHY 85
>30170.m013776 mads box protein, putative
Length = 230
Score = 73.9 bits (180), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKL 54
M R K+Q+KRIEN +RQVTF KRR+GL+KKA ELSVLCD ++ +++FS G+L
Sbjct: 1 MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRL 54
>29908.m005982 mads box protein, putative
Length = 347
Score = 73.6 bits (179), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 46/60 (76%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLYELATK 60
M R K+++KRIEN +RQVTF KRR+GL+KKA ELS+LCD +I +++FS G+L + +
Sbjct: 1 MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFSGR 60
>30138.m004061 mads box protein, putative
Length = 363
Score = 68.9 bits (167), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/53 (58%), Positives = 43/53 (81%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGK 53
M R K+++KR+E+ +RQVT+ KRR+G+LKKAKELS+LCD I +L+FS GK
Sbjct: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKAKELSILCDIHIVLLMFSPTGK 53
>29693.m002042 mads box protein, putative
Length = 220
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 2 ARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLYELA 58
R K+ MKRIEN R +TF KRRSG+ KKA EL LC AE+GIL+FS GK +
Sbjct: 9 GRQKITMKRIENEEDRLITFSKRRSGIYKKASELITLCGAEVGILVFSPAGKPFSFG 65
>29693.m002039 mads box protein, putative
Length = 172
Score = 65.1 bits (157), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLY 55
M R K++MK +++ RQVTF KRR+GL KKA EL+ LC A+I I++FS GK +
Sbjct: 1 MGRRKIEMKMVKDTSSRQVTFSKRRTGLFKKANELATLCAAQIAIVVFSPGGKPF 55
>28348.m000077 mads box protein, putative
Length = 215
Score = 64.3 bits (155), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%)
Query: 2 ARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLY 55
R K+++K++EN R VTF KR+ G+ KKA ELS LC AEI +++FS HGK++
Sbjct: 17 GRQKIEIKKLENVNRRYVTFSKRKHGIFKKATELSTLCGAEIAVVLFSGHGKVF 70
>29813.m001508 mads box protein, putative
Length = 360
Score = 63.2 bits (152), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGK 53
M R K+++K++EN RQ T+ KR+ G++KKAKELS+LCD +I +L+FS GK
Sbjct: 1 MGRVKLKIKKLENTNGRQATYGKRKHGIIKKAKELSILCDIDIILLMFSPTGK 53
>30099.m001672 mads box protein, putative
Length = 217
Score = 62.4 bits (150), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 2 ARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLYELATKG 61
R K+ M ++ N + QVTF KRRSGL KKA ELS LC AEI I++FS K++ G
Sbjct: 7 GRQKIDMVKMPNESNLQVTFSKRRSGLFKKASELSTLCGAEIAIIVFSPGKKVFSFGHPG 66
>29693.m002041 mads box protein, putative
Length = 239
Score = 58.9 bits (141), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 2 ARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLYELA 58
R K++MK+IEN R +TF KRRSG+ KKA EL L AE+ L++S GK + A
Sbjct: 12 GRQKIEMKKIENEDDRLITFSKRRSGIYKKASELVTLTGAELAFLVYSPAGKPFSFA 68
>29613.m000367 mads box protein, putative
Length = 183
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLY 55
+ R K+ +++I H QVTF KRR+GL KKA EL LC EI I++FS GK +
Sbjct: 6 LGRQKIAIEKISKKSHLQVTFSKRRAGLFKKASELCTLCGVEIAIIVFSPAGKAF 60
>30099.m001671 mads box protein, putative
Length = 226
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLY 55
+ R K+ +++I H QVTF KRR+GL KKA EL LC EI IL+FS K +
Sbjct: 26 LGRQKIAIEKISKKTHLQVTFSKRRAGLFKKASELCTLCGVEIAILVFSPANKAF 80
>27866.m000233 mads box protein, putative
Length = 217
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 2 ARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLY 55
R K+++K IE + QVTF KRR+GL KKA ELS+LC A++ +L FS K++
Sbjct: 13 GRQKIEIKPIEGKSNLQVTFSKRRAGLFKKASELSLLCGAQVAVLAFSPGKKVF 66
>28830.m000229 mads box protein, putative
Length = 197
Score = 56.2 bits (134), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLY 55
M R K QM I+ RQV+F KRR+G+ KKA EL LC E ++IFS GK +
Sbjct: 1 MGRKKTQMSLIQGESARQVSFSKRRTGIFKKASELCTLCAVEAAVVIFSPGGKAF 55
>29739.m003627 mads box protein, putative
Length = 62
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGK 53
M R K+++ R+E+ RQV + KR+ G+LKK KEL+ LCD ++G+++FS GK
Sbjct: 1 MGRRKLKILRLESVKARQVKYSKRKLGVLKKGKELATLCDVDLGLIMFSPSGK 53
>29838.m001672 mads box protein, putative
Length = 207
Score = 52.8 bits (125), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 2 ARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGKLYELAT 59
R +++M +I +R VTF KRR G+ KKA ELS LC AEI I++FS + +
Sbjct: 8 GRQRIEMVKISKESNRLVTFSKRRYGVFKKASELSTLCGAEISIIVFSPGKRAFSFGN 65
>27893.m000228 mads box protein, putative
Length = 349
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 5 KVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGK 53
K MK++E+ R V+F KRR+GL KA EL +LCDA++ +L+ S K
Sbjct: 6 KRPMKKLESQKQRSVSFTKRRNGLFNKAAELFMLCDAQLAVLVASPCSK 54
>29912.m005524 mads box protein, putative
Length = 338
Score = 50.1 bits (118), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSA 50
M RGK+ M+ I N R +T+ KR+ GL KK +E +LCD + I+IFS
Sbjct: 1 MGRGKLNMELISNEKSRMITYHKRKKGLTKKVQEFHILCDVDACIIIFSP 50
>28180.m000391 mads box protein, putative
Length = 328
Score = 45.8 bits (107), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 5 KVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSA 50
K+ MK+ E R V+F KRR GL KA EL +LCDA++ +L+ S
Sbjct: 6 KLPMKKRETKKQRSVSFTKRRYGLFNKAAELFMLCDAQLALLVSSP 51
>30190.m010925 conserved hypothetical protein
Length = 386
Score = 45.1 bits (105), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGILIFSAHGK---LYEL 57
M +++M+ IE R +T+ KR+ L+KK E S+LC E ++IF+ K + +L
Sbjct: 1 MGHSRIKMELIEKESTRMLTYQKRKKSLVKKVSEFSILCGVEACLIIFAPKHKDQPVKKL 60
Query: 58 ATKGYVLSLSHKKCIQRFFFSIKVHIYILSFFLVD 92
T S K I ++ + + Y++S + +D
Sbjct: 61 DTVWPPNSDEAKSIINKYKKTDQARCYLVSHYFLD 95