Jatropha Genome Database

JcCB0293691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0293691.10 - phase: 0 /partial
         (124 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27446.m000477 acetylornithine aminotransferase, putative              212   3e-56
30169.m006332 acetylornithine aminotransferase, putative              150   2e-37
28196.m000210 alanine-glyoxylate aminotransferase, putative            57   3e-09
29693.m001974 ornithine aminotransferase, putative                     52   9e-08
30106.m000666 aminobutyrate aminotransferase, putative                 45   1e-05

>27446.m000477 acetylornithine aminotransferase, putative
          Length = 280

 Score =  212 bits (540), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 102/125 (81%), Positives = 110/125 (88%), Gaps = 1/125 (0%)

Query: 1   MNSTQLFLNRPISLSPP-AVDLPRSFKTRACLNVDVQTTNSVKLNLKSKEVMEIEAKVLV 59
           M+STQ FLNRPISLSPP A    R+   RACLNVD+Q  +   L LKSKEV+E+EAKVLV
Sbjct: 1   MSSTQFFLNRPISLSPPPAASRHRAITPRACLNVDMQPESVKNLTLKSKEVIEMEAKVLV 60

Query: 60  GTYARNPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVS 119
           GTYARNPLVLSSGKGCKLYDPEG+EYLDCT+GIAVNALGHGDPDWVRAVTEQANLLTHVS
Sbjct: 61  GTYARNPLVLSSGKGCKLYDPEGQEYLDCTAGIAVNALGHGDPDWVRAVTEQANLLTHVS 120

Query: 120 NVYYS 124
           NVYYS
Sbjct: 121 NVYYS 125


>30169.m006332 acetylornithine aminotransferase, putative
          Length = 470

 Score =  150 bits (378), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/99 (73%), Positives = 83/99 (83%), Gaps = 3/99 (3%)

Query: 29  ACLNVDVQTTNS---VKLNLKSKEVMEIEAKVLVGTYARNPLVLSSGKGCKLYDPEGREY 85
           ACLNVDV+  NS   V +  +SKEVME E K +VGTYAR P+VL+SGKGCKLYD EGREY
Sbjct: 45  ACLNVDVRAQNSDGKVGVVRESKEVMEAEGKFMVGTYARAPVVLASGKGCKLYDVEGREY 104

Query: 86  LDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNVYYS 124
           LD TSGIAVNALGH DPDWV+AV +QA++LTHVSNVYYS
Sbjct: 105 LDMTSGIAVNALGHCDPDWVKAVVDQADVLTHVSNVYYS 143


>28196.m000210 alanine-glyoxylate aminotransferase, putative
          Length = 483

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 36/61 (59%)

Query: 62  YARNPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNV 121
           Y + PL +  GK   L+D  GR YLD  +GI   + GH  PD + A++EQ+ LL H + +
Sbjct: 81  YYQKPLNIVEGKMQYLFDESGRRYLDAFAGIVTVSCGHCHPDVLNAISEQSKLLQHATTI 140

Query: 122 Y 122
           Y
Sbjct: 141 Y 141


>29693.m001974 ornithine aminotransferase, putative
          Length = 473

 Score = 51.6 bits (122), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 47  SKEVMEIEAKVLVGTYARNPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVR 106
           S++++ +E       Y   P+V S  KG  ++DPEG +YLD  S  +    GH  P  ++
Sbjct: 35  SQQLIGLEYDFSAHNYHPVPIVFSRAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMK 94

Query: 107 AVTEQANLLTHVSNVYY 123
           A+ +QA  LT  S  +Y
Sbjct: 95  ALKDQAEKLTLSSRAFY 111


>30106.m000666 aminobutyrate aminotransferase, putative
          Length = 528

 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 30/51 (58%)

Query: 65  NPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLL 115
           +PLV+   +G  +YD  G +YLD  +G+   ALG  +P  V A TEQ N L
Sbjct: 93  DPLVIEKSEGSYVYDINGNKYLDSLAGLWCTALGGNEPRLVAAATEQLNKL 143