Jatropha Genome Database

JcCB0293431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0293431.10 + phase: 1 /partial
         (353 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007256 glycerol-3-phosphate dehydrogenase, putative            697   0.0  
29344.m000105 glycerol-3-phosphate dehydrogenase, putative            663   0.0  
29633.m000917 glycerol-3-phosphate dehydrogenase, putative             64   1e-10
29729.m002373 glycerol-3-phosphate dehydrogenase, putative             55   4e-08

>30131.m007256 glycerol-3-phosphate dehydrogenase, putative
          Length = 467

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/353 (94%), Positives = 344/353 (97%)

Query: 1   YLKYVEARLGDRTLYADEILKDGFCLNMIDTPLGPLKVVTNLQEAVWDADIVINGLPSTE 60
           YLKYVEARLGDRTLYADEILKDGFCLNMIDTPL PLKVVTNLQEAVWDADIVINGLPSTE
Sbjct: 115 YLKYVEARLGDRTLYADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE 174

Query: 61  TLEVFEEISRYWKERITVPVIISLAKGVEAELEPEPRVITPTQMINRATGIPMENILYLG 120
           T EVF++ISRYWKERITVPVIISLAKG+EAELEPEPR+ITPTQMINRATG+PMENILYLG
Sbjct: 175 TSEVFQQISRYWKERITVPVIISLAKGIEAELEPEPRIITPTQMINRATGVPMENILYLG 234

Query: 121 GPNIASEIYNKEYANARICGAEKWRKPLAMFLRQPHFIVWDNGDLVTHELMGGLKNVYAI 180
           GPNIASEIYNKEYANARICGAEKWRKPLA FLRQPHFIVWDN DLVTHE+MGGLKNVYAI
Sbjct: 235 GPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAI 294

Query: 181 GAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAW 240
           GAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPE+LAGPLLADTYVTLLKGRNAW
Sbjct: 295 GAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPERLAGPLLADTYVTLLKGRNAW 354

Query: 241 YGQHLAKGDLNLDMGDSIKGKGMIQGVSAVKAFYELLSQSCLSVLHPEENKPVAPVEICP 300
           YGQ LAKG LNLDMGDSIKGKGMIQGVSAVKAFYELLSQSCLSVLHPEE KPVAPVE+CP
Sbjct: 355 YGQQLAKGGLNLDMGDSIKGKGMIQGVSAVKAFYELLSQSCLSVLHPEEKKPVAPVELCP 414

Query: 301 ILKMLYRILITREFSAQAILQALRDETMNDPRDRIEIAQSHVFYRPSLLGQEP 353
           ILKMLYRILITREF AQAILQALRDETMNDPRDRIEIAQSHVFYR SLLG++P
Sbjct: 415 ILKMLYRILITREFPAQAILQALRDETMNDPRDRIEIAQSHVFYRASLLGKKP 467


>29344.m000105 glycerol-3-phosphate dehydrogenase, putative
          Length = 466

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/351 (90%), Positives = 334/351 (95%)

Query: 1   YLKYVEARLGDRTLYADEILKDGFCLNMIDTPLGPLKVVTNLQEAVWDADIVINGLPSTE 60
           YLKYVEARLGDRTL+ADEILKDGFCLNMIDTPL PLKVVTNLQEAVWDADIV+NG+PSTE
Sbjct: 115 YLKYVEARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGVPSTE 174

Query: 61  TLEVFEEISRYWKERITVPVIISLAKGVEAELEPEPRVITPTQMINRATGIPMENILYLG 120
           TLEVFEEIS+YWKERITVP+IISLAKGVEA LEP P +ITPTQMINRATG+ MENILYLG
Sbjct: 175 TLEVFEEISQYWKERITVPIIISLAKGVEAALEPVPHIITPTQMINRATGVSMENILYLG 234

Query: 121 GPNIASEIYNKEYANARICGAEKWRKPLAMFLRQPHFIVWDNGDLVTHELMGGLKNVYAI 180
           GPNIASEIYNKEYANARICGA+KWRKPLA FLRQPHFIVWDN DL+THE+MGGLKNVYAI
Sbjct: 235 GPNIASEIYNKEYANARICGADKWRKPLAKFLRQPHFIVWDNSDLITHEVMGGLKNVYAI 294

Query: 181 GAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAW 240
           GAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAW
Sbjct: 295 GAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAW 354

Query: 241 YGQHLAKGDLNLDMGDSIKGKGMIQGVSAVKAFYELLSQSCLSVLHPEENKPVAPVEICP 300
           YGQ LAKG+LN DMGDSI GKGMIQGVSAVKAFYELLSQ  LSVLHP E KPVAPVE+CP
Sbjct: 355 YGQMLAKGELNRDMGDSISGKGMIQGVSAVKAFYELLSQPSLSVLHPNEKKPVAPVELCP 414

Query: 301 ILKMLYRILITREFSAQAILQALRDETMNDPRDRIEIAQSHVFYRPSLLGQ 351
           ILK LY+ILI+RE S+QAILQALRDET+NDPR+RIEIAQSH FYRPSLLGQ
Sbjct: 415 ILKTLYKILISREHSSQAILQALRDETLNDPRERIEIAQSHAFYRPSLLGQ 465


>29633.m000917 glycerol-3-phosphate dehydrogenase, putative
          Length = 380

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 39/284 (13%)

Query: 41  NLQEAVWDADIVINGLPSTETLEVFEEISRYWKERITVPVIISLAKGVEAELEPEPRVIT 100
           ++  AV DA++++   P      + + + R  K+ +     ISL KG+E ++E  P +I+
Sbjct: 105 DIDNAVKDANMLVFVTPHQFMDGICKRLVRKIKDGVEA---ISLIKGMEVKMEG-PCMIS 160

Query: 101 PTQMINRATGIPMENILYLGGPNIASEIYNKEYANARICG------AEKWRKPLAMFLRQ 154
              +I+   G+   N   L G NIA+EI  ++++ A +        AEKW          
Sbjct: 161 --SLISEQLGV---NCCVLMGANIANEIAVEKFSEATVGFRTNREIAEKW----VQLFST 211

Query: 155 PHFIVWDNGDLVTHELMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLL 214
           P+F+V    D+   EL G LKNV A+ AG V  L   + T K+        EM  ++ LL
Sbjct: 212 PYFMVTAVQDVEGVELCGTLKNVVALAAGFVDGLEMGNNT-KAAMMRIGLREMRALSKLL 270

Query: 215 ---AEEPEKLAGPLLADTYVTLLKGRNAWYGQHLAK--GDLNLDMGDSIKGKGM-IQGVS 268
               ++        +AD   T L GRN    +  A+  G  + D  ++   +G  +QGVS
Sbjct: 271 FSSVKDSTFFESCGVADVITTCLGGRNRKVAEAFARNGGKRSFDELEAEMLQGQKLQGVS 330

Query: 269 AVKAFYELLSQSCLSVLHPEENKPVAPVEICPILKMLYRILITR 312
             +  YE+LS                 +E+ P+   ++ I I R
Sbjct: 331 TAREVYEVLSHR-------------GWLELFPLFATVHEICIGR 361


>29729.m002373 glycerol-3-phosphate dehydrogenase, putative
          Length = 410

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 123/292 (42%), Gaps = 34/292 (11%)

Query: 39  VTNLQEAVWDADIVINGLPSTETLEVFEEISRYWKERITVPVIISLAKGVEAELEPEPRV 98
            T+ + A+  AD  ++ +P   +    E I+ +    +     ISL+KG+E       R+
Sbjct: 140 TTDPKSALLGADYCLHAVPVQFSSSFLEGIAEFVDPGLP---FISLSKGLELN---TLRM 193

Query: 99  ITPTQMINRATGIPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAM-FLRQPHF 157
           ++  Q+I +A   P +  + L GP+ A E+ NK      +   +K     A   L   H 
Sbjct: 194 MS--QIIPQALNNPRQPFIALSGPSFALELMNKLPTAMVVASKDKKLADAAQQLLASSHL 251

Query: 158 IVWDNGDLVTHELMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEE 217
            +  + D+   E+ G LKNV AI AG+V  + N    S +   A   SE+ ++   +  +
Sbjct: 252 RISTSSDVTGVEIAGALKNVLAIAAGIVEGM-NLGNNSMAALVAQGCSEIRWLATKMGAK 310

Query: 218 PEKL-----AGPLLADTYVTLLKGRNAWYGQHLAKGDLNLDMGDSIKGKGMIQGVSAVKA 272
           P  +      G ++   +V L   RN   G  L  G+   D+  S+    + +GVS   A
Sbjct: 311 PATITGLSGTGDIMLTCFVNL--SRNKTVGVRLGSGEKLDDILSSM--NQVAEGVSTAGA 366

Query: 273 FYELLSQSCLSVLHPEENKPVAPVEICPILKMLYRILITREFSAQAILQALR 324
              L  +  + +               P+L  + RI+       +A+L+ +R
Sbjct: 367 VIALAQKYNVKM---------------PVLTAVARIVDNELTPKKAVLELMR 403