Jatropha Genome Database
- JcCB0293081.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0293081.10 + phase: 0 /partial/short
(49 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008934 mads box protein, putative 95 8e-21
30138.m003939 mads box protein, putative 87 2e-18
30147.m014133 mads box protein, putative 84 1e-17
29908.m005982 mads box protein, putative 84 2e-17
30170.m013776 mads box protein, putative 82 7e-17
29907.m000663 mads box protein, putative 79 3e-16
29648.m001978 mads box protein, putative 78 9e-16
29782.m000119 Floral homeotic protein DEFICIENS, putative 76 3e-15
30221.m002218 mads box protein, putative 75 8e-15
29596.m000699 mads box protein, putative 73 3e-14
29804.m001536 mads box protein, putative 73 3e-14
29838.m001690 mads box protein, putative 72 7e-14
30138.m004061 mads box protein, putative 70 3e-13
29693.m002039 mads box protein, putative 63 4e-11
27866.m000233 mads box protein, putative 62 8e-11
29813.m001508 mads box protein, putative 61 1e-10
30099.m001672 mads box protein, putative 60 2e-10
28348.m000077 mads box protein, putative 60 2e-10
29693.m002042 mads box protein, putative 59 4e-10
29838.m001672 mads box protein, putative 59 5e-10
29693.m002041 mads box protein, putative 56 3e-09
30099.m001671 mads box protein, putative 56 3e-09
29613.m000367 mads box protein, putative 56 4e-09
29912.m005524 mads box protein, putative 55 9e-09
28830.m000229 mads box protein, putative 54 1e-08
27893.m000228 mads box protein, putative 51 1e-07
29739.m003627 mads box protein, putative 50 2e-07
30190.m010925 conserved hypothetical protein 50 2e-07
28180.m000391 mads box protein, putative 49 6e-07
>30174.m008934 mads box protein, putative
Length = 244
Score = 94.7 bits (234), Expect = 8e-21, Method: Composition-based stats.
Identities = 48/49 (97%), Positives = 49/49 (100%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS 49
>30138.m003939 mads box protein, putative
Length = 244
Score = 86.7 bits (213), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/49 (87%), Positives = 48/49 (97%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGRGRV+LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVALI+FS
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFS 49
>30147.m014133 mads box protein, putative
Length = 213
Score = 84.3 bits (207), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 46/49 (93%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
M RG+++++RIEN +RQVTF+KRRNGLLKKAYELSVLCDAEVA+IIFS
Sbjct: 1 MVRGKIQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFS 49
>29908.m005982 mads box protein, putative
Length = 347
Score = 83.6 bits (205), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/49 (73%), Positives = 45/49 (91%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGR ++E+KRIEN NRQVTF+KRRNGL+KKAYELS+LCD ++ALI+FS
Sbjct: 1 MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFS 49
>30170.m013776 mads box protein, putative
Length = 230
Score = 81.6 bits (200), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 45/49 (91%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGR ++++KRIEN NRQVTF+KRRNGL+KKAYELSVLCD +VALI+FS
Sbjct: 1 MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFS 49
>29907.m000663 mads box protein, putative
Length = 205
Score = 79.3 bits (194), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
M RG+V++KRIEN ++RQVTF KRR+GLLKKA ELSVLCDAE+ L IFS
Sbjct: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGLFIFS 49
>29648.m001978 mads box protein, putative
Length = 234
Score = 78.2 bits (191), Expect = 9e-16, Method: Composition-based stats.
Identities = 36/49 (73%), Positives = 46/49 (93%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGRGR+E+KRIEN NRQVT++KRRNG++KKA E++VLCDAEV+LIIF+
Sbjct: 1 MGRGRIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAEVSLIIFA 49
>29782.m000119 Floral homeotic protein DEFICIENS, putative
Length = 235
Score = 76.3 bits (186), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/49 (69%), Positives = 45/49 (91%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGRG++E+K+IEN NRQVT++KRRNG+ KKA EL+VLCDA+V+LI+FS
Sbjct: 1 MGRGKIEIKKIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFS 49
>30221.m002218 mads box protein, putative
Length = 233
Score = 74.7 bits (182), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/49 (71%), Positives = 43/49 (87%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGRG++ +KRIEN+ RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS
Sbjct: 1 MGRGKIPIKRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFS 49
>29596.m000699 mads box protein, putative
Length = 262
Score = 73.2 bits (178), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/49 (67%), Positives = 44/49 (89%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGRG++ ++RI+N +RQVTF+KRRNGLLKKA EL++LCDAEV ++IFS
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFS 49
>29804.m001536 mads box protein, putative
Length = 266
Score = 73.2 bits (178), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/49 (71%), Positives = 44/49 (89%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGRG++ ++RI+N +RQVTF+KRRNGLLKKA ELS+LCDAEV +IIFS
Sbjct: 28 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGVIIFS 76
>29838.m001690 mads box protein, putative
Length = 61
Score = 71.6 bits (174), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 41/49 (83%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
M R ++++K+I+N RQVTF+KRR GL KKAYELS LCDAE+AL++FS
Sbjct: 1 MTRQKIQIKKIDNITARQVTFSKRRRGLFKKAYELSTLCDAEIALLVFS 49
>30138.m004061 mads box protein, putative
Length = 363
Score = 69.7 bits (169), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 42/49 (85%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGR ++++KR+E+ NRQVT++KRRNG+LKKA ELS+LCD + L++FS
Sbjct: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKAKELSILCDIHIVLLMFS 49
>29693.m002039 mads box protein, putative
Length = 172
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 40/49 (81%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGR ++E+K +++ +RQVTF+KRR GL KKA EL+ LC A++A+++FS
Sbjct: 1 MGRRKIEMKMVKDTSSRQVTFSKRRTGLFKKANELATLCAAQIAIVVFS 49
>27866.m000233 mads box protein, putative
Length = 217
Score = 61.6 bits (148), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
GR ++E+K IE K N QVTF+KRR GL KKA ELS+LC A+VA++ FS
Sbjct: 13 GRQKIEIKPIEGKSNLQVTFSKRRAGLFKKASELSLLCGAQVAVLAFS 60
>29813.m001508 mads box protein, putative
Length = 360
Score = 61.2 bits (147), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 40/49 (81%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGR ++++K++EN RQ T+ KR++G++KKA ELS+LCD ++ L++FS
Sbjct: 1 MGRVKLKIKKLENTNGRQATYGKRKHGIIKKAKELSILCDIDIILLMFS 49
>30099.m001672 mads box protein, putative
Length = 217
Score = 60.1 bits (144), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
GR ++++ ++ N+ N QVTF+KRR+GL KKA ELS LC AE+A+I+FS
Sbjct: 7 GRQKIDMVKMPNESNLQVTFSKRRSGLFKKASELSTLCGAEIAIIVFS 54
>28348.m000077 mads box protein, putative
Length = 215
Score = 60.1 bits (144), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
GR ++E+K++EN R VTF+KR++G+ KKA ELS LC AE+A+++FS
Sbjct: 17 GRQKIEIKKLENVNRRYVTFSKRKHGIFKKATELSTLCGAEIAVVLFS 64
>29693.m002042 mads box protein, putative
Length = 220
Score = 59.3 bits (142), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
GR ++ +KRIEN+ +R +TF+KRR+G+ KKA EL LC AEV +++FS
Sbjct: 9 GRQKITMKRIENEEDRLITFSKRRSGIYKKASELITLCGAEVGILVFS 56
>29838.m001672 mads box protein, putative
Length = 207
Score = 58.9 bits (141), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
GR R+E+ +I + NR VTF+KRR G+ KKA ELS LC AE+++I+FS
Sbjct: 8 GRQRIEMVKISKESNRLVTFSKRRYGVFKKASELSTLCGAEISIIVFS 55
>29693.m002041 mads box protein, putative
Length = 239
Score = 56.2 bits (134), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 38/48 (79%)
Query: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
GR ++E+K+IEN+ +R +TF+KRR+G+ KKA EL L AE+A +++S
Sbjct: 12 GRQKIEMKKIENEDDRLITFSKRRSGIYKKASELVTLTGAELAFLVYS 59
>30099.m001671 mads box protein, putative
Length = 226
Score = 56.2 bits (134), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
+GR ++ +++I K + QVTF+KRR GL KKA EL LC E+A+++FS
Sbjct: 26 LGRQKIAIEKISKKTHLQVTFSKRRAGLFKKASELCTLCGVEIAILVFS 74
>29613.m000367 mads box protein, putative
Length = 183
Score = 55.8 bits (133), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
+GR ++ +++I K + QVTF+KRR GL KKA EL LC E+A+I+FS
Sbjct: 6 LGRQKIAIEKISKKSHLQVTFSKRRAGLFKKASELCTLCGVEIAIIVFS 54
>29912.m005524 mads box protein, putative
Length = 338
Score = 54.7 bits (130), Expect = 9e-09, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGRG++ ++ I N+ +R +T+ KR+ GL KK E +LCD + +IIFS
Sbjct: 1 MGRGKLNMELISNEKSRMITYHKRKKGLTKKVQEFHILCDVDACIIIFS 49
>28830.m000229 mads box protein, putative
Length = 197
Score = 54.3 bits (129), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGR + ++ I+ + RQV+F+KRR G+ KKA EL LC E A++IFS
Sbjct: 1 MGRKKTQMSLIQGESARQVSFSKRRTGIFKKASELCTLCAVEAAVVIFS 49
>27893.m000228 mads box protein, putative
Length = 349
Score = 50.8 bits (120), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 33/42 (78%)
Query: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
+K++E++ R V+F KRRNGL KA EL +LCDA++A+++ S
Sbjct: 9 MKKLESQKQRSVSFTKRRNGLFNKAAELFMLCDAQLAVLVAS 50
>29739.m003627 mads box protein, putative
Length = 62
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MGR ++++ R+E+ RQV ++KR+ G+LKK EL+ LCD ++ LI+FS
Sbjct: 1 MGRRKLKILRLESVKARQVKYSKRKLGVLKKGKELATLCDVDLGLIMFS 49
>30190.m010925 conserved hypothetical protein
Length = 386
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
MG R++++ IE + R +T+ KR+ L+KK E S+LC E LIIF+
Sbjct: 1 MGHSRIKMELIEKESTRMLTYQKRKKSLVKKVSEFSILCGVEACLIIFA 49
>28180.m000391 mads box protein, putative
Length = 328
Score = 48.5 bits (114), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 5 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS 49
++ +K+ E K R V+F KRR GL KA EL +LCDA++AL++ S
Sbjct: 6 KLPMKKRETKKQRSVSFTKRRYGLFNKAAELFMLCDAQLALLVSS 50