Jatropha Genome Database
- JcCB0292291.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0292291.10 + phase: 1 /pseudo/partial
(439 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006480 hypothetical protein 532 e-151
29991.m000631 DNA binding protein, putative 222 3e-58
29844.m003292 hypothetical protein 63 2e-10
30150.m000485 DNA binding protein, putative 62 4e-10
30078.m002221 DNA binding protein, putative 57 2e-08
29589.m001275 protein binding protein, putative 55 9e-08
29840.m000626 chromodomain helicase DNA binding protein, putative 54 1e-07
29624.m000323 conserved hypothetical protein 52 4e-07
30169.m006272 conserved hypothetical protein 50 2e-06
29647.m002062 conserved hypothetical protein 50 3e-06
29822.m003351 DNA binding protein, putative 48 8e-06
>30169.m006480 hypothetical protein
Length = 1915
Score = 532 bits (1370), Expect = e-151, Method: Compositional matrix adjust.
Identities = 249/322 (77%), Positives = 272/322 (84%)
Query: 1 SPAVSALTEEKPMKSCHEWPREPVVLPPKAQLPPSSQNLDLSGISISDFFSVYACLRXXX 60
SPAVSAL EEKP KSCH W EPVVLP QLPPSS+NLDL G + D FSVYACLR
Sbjct: 493 SPAVSALAEEKPAKSCHGWHEEPVVLPAMVQLPPSSRNLDLDGNLVVDLFSVYACLRSFS 552
Query: 61 XXXXXXXXXXXXXVAALKCNSPSALFDCIHVSVLQTLRKHLECLSNEGSESASNCLRSLD 120
VAALKCN+PS+LFDCIHVS+LQTL+KH+E LSNEGSESASNCLRSL+
Sbjct: 553 TLLFLSPFDLEEFVAALKCNTPSSLFDCIHVSILQTLKKHVEYLSNEGSESASNCLRSLN 612
Query: 121 WDLLDLNTWPVFMVEYLLIHGSDLKPGFDLTLLKLLKSDYYKQSVSVKVEILRCLCDDMI 180
W LDL TWPVFMVEY LIHG+DLKPG +L+ LKLLK DYYKQ VS+K+EILRCLCD MI
Sbjct: 613 WGFLDLITWPVFMVEYFLIHGTDLKPGINLSHLKLLKDDYYKQPVSLKIEILRCLCDGMI 672
Query: 181 EVEAIRSELNRRSSGSEFDLDFDRNTTIGALKKKRAGMDLSGGSCITEDAVDDSTDWNSD 240
EV+ +RSELNRRSSG+E D+D DRN GALKK+R+GMD+S GSC+TED VD+STDWNSD
Sbjct: 673 EVDILRSELNRRSSGAESDIDIDRNMNFGALKKRRSGMDVSTGSCLTEDTVDESTDWNSD 732
Query: 241 ECCLCKMDGSLICCDGCPAAYHSKCVGVANDSLPEGDWFCPECAIDRHKPWMKPRKSLRG 300
ECCLCKMDG+LICCDGCPAAYHSKCVGVANDSLPEGDWFCPECAIDRHKPWMK R SLRG
Sbjct: 733 ECCLCKMDGNLICCDGCPAAYHSKCVGVANDSLPEGDWFCPECAIDRHKPWMKTRNSLRG 792
Query: 301 AELFGVDPYGRLYFSSCGYLLV 322
AEL GVDPYGRLYFSSCGYLLV
Sbjct: 793 AELLGVDPYGRLYFSSCGYLLV 814
>29991.m000631 DNA binding protein, putative
Length = 1723
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/317 (39%), Positives = 181/317 (57%), Gaps = 30/317 (9%)
Query: 35 SSQNLDLSGISISDFFSVYACLRXXXXXXXXXXXXXXXXVAALKCNSPSALFDCIHVSVL 94
SS+ + + +S FSVY LR V A+ C+ + L D IHV+++
Sbjct: 186 SSETIGVPKECVSHLFSVYGFLRSFNILLFLSPFTLDDLVGAINCHVQNTLSDAIHVALM 245
Query: 95 QTLRKHLECLSNEGSESASNCLRSLDWDLLDLNTWPVFMVEYLLIHGSDLKPGFDLTLLK 154
+ LR+HLE LS++GSE AS CLR LDW LLD TWPV++V+Y + G +P +
Sbjct: 246 RALRRHLEALSSDGSEVASKCLRCLDWSLLDSLTWPVYLVQYFTVMGYAKRPEWKGFYDD 305
Query: 155 LLKSDYYKQSVSVKVEILRCLCDDMIEVEAIRSELNRRSSGSEFDLDFD----------- 203
+LK +YY VS K+ IL+ LCDD+++ IR+E++ R SE +D D
Sbjct: 306 ILKREYYSLPVSRKLMILQILCDDVLDCAEIRAEIDAREE-SEVGMDPDAIATSLSENGP 364
Query: 204 -----RNTTIGALKKKRAGMDL------SGGSCITE------DAVDDSTDWNSDECCLCK 246
R + A K K A M++ + SC ++ D + D NSDEC LC
Sbjct: 365 RRVHPRYSKTSACKDKEA-MEIIAENQGTKSSCCSKYLGWEGDGHNVGMDGNSDECRLCG 423
Query: 247 MDGSLICCDGCPAAYHSKCVGVANDSLPEGDWFCPECAIDRHKPWMKPRKSLRGAELFGV 306
MDG+L+CCDGCP+AYHS+C+GV +P+G W+CPEC I++ P + SL+GAE+FGV
Sbjct: 424 MDGTLLCCDGCPSAYHSRCIGVVKMYIPDGPWYCPECTINKLGPTIIMGTSLKGAEIFGV 483
Query: 307 DPYGRLYFSSCGYLLVL 323
D Y +++ +C +LLVL
Sbjct: 484 DLYEQVFLGTCNHLLVL 500
>29844.m003292 hypothetical protein
Length = 1604
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 233 DSTDWNSDECCLCKMDGSLICCDGCPAAYHSKCVGVANDSLPEGDWFCPECA 284
D D N D C +C G LICCDGCP+ +H C+ + LP GDW CP C
Sbjct: 755 DGDDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIM--MLPPGDWHCPNCT 804
>30150.m000485 DNA binding protein, putative
Length = 1336
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 236 DWNSDECCLCKMDGSLICCDGCPAAYHSKCVGVANDSLPEGDWFCPECA 284
D N D C LC G LICCD CP+ +H C ++ + LPEG W+CP C
Sbjct: 863 DENDDSCGLCGDGGELICCDNCPSTFHQAC--LSTEELPEGSWYCPNCT 909
>30078.m002221 DNA binding protein, putative
Length = 855
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 238 NSDECCLCKMDGSLICCDGCPAAYHSKCVGVANDSLPEGDWFCPECA--IDRHKPWMKPR 295
N D C +C GSLI CDGCP A+H C ++ S+P G WFC C R K
Sbjct: 481 NDDLCIVCADGGSLILCDGCPRAFHKGCASLS--SIPRGKWFCQFCQNMFQREKFVEHNA 538
Query: 296 KSLRGAELFGVDP 308
++ + GVDP
Sbjct: 539 NAVAAGRISGVDP 551
>29589.m001275 protein binding protein, putative
Length = 1042
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 234 STDWNSDECCLCKMDGSLICCDGCPAAYHSKCVGVANDSLPEGDWFCPEC--AIDRHKPW 291
ST N D C +C+ G L+CCD CP AYH C+ + +P G W+C C + K
Sbjct: 663 STHQNDDLCQICRDGGDLLCCDVCPRAYHKDCLALP--EIPTGRWYCKFCLNNFQKEKFV 720
Query: 292 MKPRKSLRGAELFGVDPYGRL 312
++ + GVDP ++
Sbjct: 721 EHNANAIAAGRVAGVDPIDQI 741
>29840.m000626 chromodomain helicase DNA binding protein, putative
Length = 2257
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 241 ECCLCKMDGSLICCDGCPAAYHSKCVGVANDSLPEGDWFCPEC 283
EC +C + G+L+CCD CP YH +C+ +P G W CP+C
Sbjct: 77 ECVICDLGGNLLCCDSCPRVYHLQCLDPPLKRIPMGKWQCPKC 119
>29624.m000323 conserved hypothetical protein
Length = 853
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 238 NSDECCLCKMDGSLICCDGCPAAYHSKCVGVANDSLPEGDWFCPEC 283
N C +C G LI CD CP+++H C+G+ + +P+GDWFC C
Sbjct: 429 NDHICSVCHYGGELILCDQCPSSFHKSCLGLMD--VPDGDWFCSSC 472
>30169.m006272 conserved hypothetical protein
Length = 602
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 241 ECCLCKMDGSLICCDGCPAAYHSKCVGVANDSLPEGDWFCPEC 283
EC +C G L+CCD CP YH +C+ + +P G+W C C
Sbjct: 63 ECVICDNGGDLLCCDTCPGTYHLQCLTPPLELVPSGNWQCENC 105
>29647.m002062 conserved hypothetical protein
Length = 1700
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 233 DSTDWNSDECCLCKMDGSLICCDGCPAAYHSKCVGVANDSLPEGDWFCPEC 283
D D N D C +C G LICCD CP+ +H C+ + P G W C C
Sbjct: 863 DGEDPNDDTCGICGDGGDLICCDSCPSTFHQSCLEIR--KFPSGLWHCMYC 911
>29822.m003351 DNA binding protein, putative
Length = 2145
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 237 WNSDECCLC---KMDGSLICCDGCPAAYHSKCVGVANDSLPEGDWFCPEC 283
W+ C +C K D S++ CD C A YH+ C+ +PEG+W+CP C
Sbjct: 1218 WDEGVCKVCGFDKDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSC 1267