Jatropha Genome Database

JcCB0285631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0285631.10 - phase: 0 
         (82 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29999.m000206 arginine biosynthesis protein argJ 1, putative          104   8e-24

>29999.m000206 arginine biosynthesis protein argJ 1, putative
          Length = 469

 Score =  104 bits (260), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 41/63 (65%), Positives = 53/63 (84%)

Query: 1  MYCCVPHYVSMKFPELSTSKIFSSFSLTKRDFKVFAVASSMDETANYIPAAPIFIPEGPW 60
          MY C PH+VS+KFP+L +SK    F ++KR+FKVFA+ASS++E +NYIPAAPI IPEGPW
Sbjct: 1  MYTCAPHFVSIKFPDLHSSKTLRPFGMSKREFKVFALASSVNEASNYIPAAPILIPEGPW 60

Query: 61 NQV 63
          NQ+
Sbjct: 61 NQI 63