Jatropha Genome Database

JcCB0285141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0285141.10 - phase: 0 /partial
         (412 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29832.m000313 6-phosphogluconate dehydrogenase, putative              753   0.0  
29841.m002898 6-phosphogluconate dehydrogenase, putative              625   e-179
30190.m010775 6-phosphogluconate dehydrogenase, putative              618   e-177
55853.m000020 conserved hypothetical protein                           54   2e-07

>29832.m000313 6-phosphogluconate dehydrogenase, putative
          Length = 488

 Score =  753 bits (1945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/407 (89%), Positives = 387/407 (95%)

Query: 6   RIGLAGLAVMGQNLALNIAEKGFPISVYNRTASKVDETVARAKQEGDLPLYGFRDPESFV 65
           RIGLAGLAVMGQNLALNIAEKGFPISVYNRT SKVDETV RAK+EGDLPLYGF DPESFV
Sbjct: 9   RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKREGDLPLYGFHDPESFV 68

Query: 66  NSIQKPRVIIMLVKAGPPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERREKAMADLGLL 125
            SIQKPRVIIMLVKAG PVDQTIKTLS YMEKGDCIIDGGNEWYENTERREKAMADLGL 
Sbjct: 69  KSIQKPRVIIMLVKAGAPVDQTIKTLSAYMEKGDCIIDGGNEWYENTERREKAMADLGLQ 128

Query: 126 YLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQVRDSGPCVTYIGKGGSGNF 185
           YLGMGVSGGEEGAR+GPSLMPGGSFEAYKYIEDILLKVAAQV DSGPCVTYIGKGGSGNF
Sbjct: 129 YLGMGVSGGEEGARNGPSLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYIGKGGSGNF 188

Query: 186 VKMVHNGIEYGDMQLIAEAYDVLKSVGKLTNEELRQVFSEWNKGELMSFLIEITADIFGI 245
           VKMVHNGIEYGDMQLIAEAYDVLKS+GKL+NEEL+ VF+EWNKGEL+SFLIEITADIFGI
Sbjct: 189 VKMVHNGIEYGDMQLIAEAYDVLKSIGKLSNEELQSVFAEWNKGELLSFLIEITADIFGI 248

Query: 246 RDDKGDGYLVDKVLDKTGMKGTGKWTVQQAAELSVAAPTIASSLDGRFLSGLKEERIEAA 305
           +DDKGDGYLVDKVLDKTGMKGTGKWTVQQAA+LSVAAPTIASSLD RFLSGLKEER+EAA
Sbjct: 249 KDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAA 308

Query: 306 KIFKSSGVGDILADQVVNKEKLIGDAGQALYASKICSYAQGMNLIRAKSAEKGWDLKLGE 365
           K+FKS G GDIL DQV++K+KL+ D  QALYA+KICSYAQGMNLIRAKS EK WDLKLGE
Sbjct: 309 KVFKSGGFGDILTDQVIDKKKLVDDVRQALYAAKICSYAQGMNLIRAKSIEKVWDLKLGE 368

Query: 366 LARIWKGGCIIRAVFLNRIKQAYDRNPDLPNLLVDPEFAREIIERQS 412
           LARIWKGGCIIRAVFL+RIK+AYDRN DL NLLVDPEFA+EI++RQS
Sbjct: 369 LARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQS 415


>29841.m002898 6-phosphogluconate dehydrogenase, putative
          Length = 495

 Score =  625 bits (1612), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 306/411 (74%), Positives = 351/411 (85%), Gaps = 3/411 (0%)

Query: 4   LIRIGLAGLAVMGQNLALNIAEKGFPISVYNRTASKVDETVARAKQEGDLPLYGFRDPES 63
           L RIGLAGLAVMGQNLALNIAEKGFPISVYNR+ SKVDET+ RA+ EG  PL G   P  
Sbjct: 7   LSRIGLAGLAVMGQNLALNIAEKGFPISVYNRSTSKVDETIHRAQNEGPFPLTGHYTPRD 66

Query: 64  FVNSIQKPRVIIMLVKAGPPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERREKAMADLG 123
           FV S+Q+PR +I+LVKAG PVDQTI  LS +ME GDCIIDGGNEWY+NTERR       G
Sbjct: 67  FVLSLQRPRSVIILVKAGAPVDQTIAALSEHMEAGDCIIDGGNEWYQNTERRIDEANQKG 126

Query: 124 LLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQVRDSGPCVTYIGKGGSG 183
           LLYLGMGVSGGEEGAR GPSLMPGGSFEAY  I+DIL KVAAQV D GPCVTYIG+GGSG
Sbjct: 127 LLYLGMGVSGGEEGARFGPSLMPGGSFEAYNNIKDILQKVAAQVED-GPCVTYIGEGGSG 185

Query: 184 NFVKMVHNGIEYGDMQLIAEAYDVLKSVGKLTNEELRQVFSEWNKGELMSFLIEITADIF 243
           NFVKMVHNGIEYGDMQLI+EAYDVLK+VG L+N EL ++F+EWNKGEL SFLIEIT+DIF
Sbjct: 186 NFVKMVHNGIEYGDMQLISEAYDVLKNVGGLSNAELAEIFTEWNKGELESFLIEITSDIF 245

Query: 244 GIRDDKGDGYLVDKVLDKTGMKGTGKWTVQQAAELSVAAPTIASSLDGRFLSGLKEERIE 303
            ++D+ GDG LVDK+LDKTGMKGTGKWTVQQAAELSVAAPTIA+SLD R+LSGLKEER  
Sbjct: 246 RVKDEHGDGELVDKILDKTGMKGTGKWTVQQAAELSVAAPTIAASLDCRYLSGLKEERES 305

Query: 304 AAKIFKSSGVGDIL--ADQVVNKEKLIGDAGQALYASKICSYAQGMNLIRAKSAEKGWDL 361
           AA++ K +G+ + +      ++K++LI D  QALYASKICSYAQGMNL+RAKS EKGW+L
Sbjct: 306 AAQVLKEAGLKEEVEAVKSGIDKKRLIDDVRQALYASKICSYAQGMNLLRAKSVEKGWNL 365

Query: 362 KLGELARIWKGGCIIRAVFLNRIKQAYDRNPDLPNLLVDPEFAREIIERQS 412
             GELARIWKGGCIIRAVFL+RIK+AY RNP+L +L+VDPEFARE+++RQ+
Sbjct: 366 NFGELARIWKGGCIIRAVFLDRIKKAYQRNPNLASLVVDPEFAREMVQRQA 416


>30190.m010775 6-phosphogluconate dehydrogenase, putative
          Length = 495

 Score =  618 bits (1593), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 305/413 (73%), Positives = 350/413 (84%), Gaps = 7/413 (1%)

Query: 4   LIRIGLAGLAVMGQNLALNIAEKGFPISVYNRTASKVDETVARAKQEGDLPLYGFRDPES 63
           L RIGLAGLAVMGQNLALNIAEKGFPISVYNR+ SKVD+T+ RA+ EG  PL G   P  
Sbjct: 7   LSRIGLAGLAVMGQNLALNIAEKGFPISVYNRSTSKVDDTIHRAQNEGPFPLTGHYTPRD 66

Query: 64  FVNSIQKPRVIIMLVKAGPPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERREKAMADLG 123
           FV S+Q+PR +I+LVKAG PVDQTI  LS +ME GDCIIDGGNEWY+NTERR       G
Sbjct: 67  FVLSLQRPRSVIILVKAGAPVDQTIAALSEHMEAGDCIIDGGNEWYQNTERRIDEANQKG 126

Query: 124 LLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQVRDSGPCVTYIGKGGSG 183
           +LYLGMGVSGGEEGAR GPSLMPGGSFEAY  I+DIL KVAAQV D GPCVTYIG+GGSG
Sbjct: 127 ILYLGMGVSGGEEGARFGPSLMPGGSFEAYNNIKDILQKVAAQVED-GPCVTYIGEGGSG 185

Query: 184 NFVKMVHNGIEYGDMQLIAEAYDVLKSVGKLTNEELRQVFSEWNKGELMSFLIEITADIF 243
           NFVKMVHNGIEYGDMQLI+EAYDVLK+VG L+N EL  +F+EWNKGEL SFLIEIT+DIF
Sbjct: 186 NFVKMVHNGIEYGDMQLISEAYDVLKNVGGLSNAELADIFTEWNKGELESFLIEITSDIF 245

Query: 244 GIRDDKGDGYLVDKVLDKTGMKGTGKWTVQQAAELSVAAPTIASSLDGRFLSGLKEERIE 303
            ++D+ GDG LVDK+LDKTGMKGTGKWTVQQAAELSVAAPTIA+SLD R+LSGLKEER  
Sbjct: 246 RVKDEHGDGELVDKILDKTGMKGTGKWTVQQAAELSVAAPTIAASLDCRYLSGLKEERES 305

Query: 304 AAKIFKSSG----VGDILADQVVNKEKLIGDAGQALYASKICSYAQGMNLIRAKSAEKGW 359
           AA++ K +G    VG + +   ++K++LI D  QALYASKICSYAQGMNL+RAKS EK W
Sbjct: 306 AAEVLKEAGLKEEVGTVKSG--IDKKRLIDDVRQALYASKICSYAQGMNLLRAKSVEKRW 363

Query: 360 DLKLGELARIWKGGCIIRAVFLNRIKQAYDRNPDLPNLLVDPEFAREIIERQS 412
           +L  GELARIWKGGCIIRAVFL+RIK+AY RNP+L +L+VDPEFARE+++RQ+
Sbjct: 364 NLNFGELARIWKGGCIIRAVFLDRIKKAYQRNPNLASLVVDPEFAREMVQRQA 416


>55853.m000020 conserved hypothetical protein
          Length = 68

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/43 (58%), Positives = 31/43 (72%)

Query: 7  IGLAGLAVMGQNLALNIAEKGFPISVYNRTASKVDETVARAKQ 49
          IGL GLAVMGQNLALNIA+ G+ I+VYNR   K+   +   K+
Sbjct: 8  IGLVGLAVMGQNLALNIADHGYTIAVYNRDPKKMLNFIEECKK 50