Jatropha Genome Database

JcCB0284961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0284961.10 + phase: 0 /pseudo/partial
         (189 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006860 conserved hypothetical protein                          295   9e-81
30204.m001803 Abscisic acid-insensitive protein, putative              96   7e-21
30190.m010868 hypothetical protein                                     86   9e-18
29976.m000497 transcription factor, putative                           67   5e-12
29915.m000469 transcription factor, putative                           66   9e-12
29917.m001969 transcription factor, putative                           64   5e-11

>30131.m006860 conserved hypothetical protein
          Length = 321

 Score =  295 bits (755), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 146/175 (83%), Positives = 155/175 (88%), Gaps = 11/175 (6%)

Query: 25  IVLQKAAEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNTH 84
           ++ +KAAEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNTH
Sbjct: 148 VLPKKAAEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNTH 207

Query: 85  GLQLGDFIM----------VIQARKASDEDVYANIAMTAVNDIFLHDYEVNKSSSFYMNY 134
           GLQLGDFIM          VIQA+KASDEDVYANIA TAVNDI L+D E+NKSSSFYMNY
Sbjct: 208 GLQLGDFIMVYKDDQNQNYVIQAKKASDEDVYANIARTAVNDIVLYDCEINKSSSFYMNY 267

Query: 135 PMVDNTGLSFIYDTTTIISNDSPLDFLGGSLTNYSRIGQMENFGSVENLSLDEFN 189
           P+VDNTGLSFIYDTTT  S+DSPLDFLGGSLTNYSRIG  E FG VE+LSLDEFN
Sbjct: 268 PIVDNTGLSFIYDTTT-FSDDSPLDFLGGSLTNYSRIGHRETFGPVESLSLDEFN 321


>30204.m001803 Abscisic acid-insensitive protein, putative
          Length = 551

 Score = 96.3 bits (238), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 57/72 (79%), Gaps = 2/72 (2%)

Query: 25  IVLQKAAEAHLPVLESKEGIFISMDDLDGLHVWSFKY--RYWPNNNSRMYVLENTGDFVN 82
           ++ +K AE HLP LE+++GI I+M+D+    VW+ +Y  R+WPNN SRMY+LENTGDFV 
Sbjct: 425 VLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYSFRFWPNNKSRMYLLENTGDFVR 484

Query: 83  THGLQLGDFIMV 94
           T+GLQ GDFI++
Sbjct: 485 TNGLQEGDFIVI 496


>30190.m010868 hypothetical protein
          Length = 418

 Score = 85.9 bits (211), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 51/70 (72%)

Query: 25  IVLQKAAEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNTH 84
           ++ ++ AE +LP+L  KEGI +++ D+     WS KY+YW NN SRMYVLENTGDFV  +
Sbjct: 182 VLPKREAEENLPILSDKEGILVAIRDVCSTKEWSLKYKYWSNNKSRMYVLENTGDFVKQN 241

Query: 85  GLQLGDFIMV 94
           G+++GD + +
Sbjct: 242 GMRIGDSLTL 251


>29976.m000497 transcription factor, putative
          Length = 861

 Score = 67.0 bits (162), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 12/104 (11%)

Query: 21  RLM*IVLQKA-AEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGD 79
           R+  +VL KA AEA+ P +   EG+ + + D+ G   W+F++R+WPNNNSRMYVLE    
Sbjct: 338 RIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKGRE-WTFQFRFWPNNNSRMYVLEGVTP 396

Query: 80  FVNTHGLQLGDFI----------MVIQARKASDEDVYANIAMTA 113
            +    L+ GD I          +V+  RKA++  +    A T+
Sbjct: 397 CIQAMKLRAGDTITFSRIDPGGKLVVGFRKATNNSLDTQDAQTS 440


>29915.m000469 transcription factor, putative
          Length = 891

 Score = 66.2 bits (160), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 12/93 (12%)

Query: 21  RLM*IVLQKA-AEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGD 79
           R+  +VL KA AEA+ P +   EG+ + + D+ G   W F++R+WPNNNSRMYVLE    
Sbjct: 347 RIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKE-WVFQFRFWPNNNSRMYVLEGVTP 405

Query: 80  FVNTHGLQLGDFI----------MVIQARKASD 102
            + +  LQ GD +          +V+  RKAS+
Sbjct: 406 CIQSMQLQAGDTVTFSRMDPEGKLVMGFRKASN 438


>29917.m001969 transcription factor, putative
          Length = 854

 Score = 63.9 bits (154), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 25  IVLQKAAEAHLPVLESKEGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNTH 84
           ++ +K AEA+ P +   EG+ + + D  G   W F++R+WPNNNSRMYVLE     +   
Sbjct: 341 VLPKKCAEAYFPPISHPEGLPLKVQDAKGRE-WIFQFRFWPNNNSRMYVLEGVTPCIQNM 399

Query: 85  GLQLGDFI 92
            LQ GD +
Sbjct: 400 RLQAGDIV 407