Jatropha Genome Database

JcCB0284841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0284841.10 + phase: 0 /partial
         (88 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30027.m000843 ATATH8, putative                                        132   3e-32
29933.m001441 ATATH13, putative                                       128   4e-31

>30027.m000843 ATATH8, putative
          Length = 496

 Score =  132 bits (333), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/80 (76%), Positives = 70/80 (87%), Gaps = 3/80 (3%)

Query: 1   EVENCYNSWRSPN--EVNPAECIQQLLEHVRRHKVNIDGDICIVMVTTLVLEGWQQKLDP 58
           EVE CYNSW SP+   V+PAEC+QQLLEHVRRHKVNIDG +CIVMVTTLVLEGWQ+KLDP
Sbjct: 396 EVEKCYNSWNSPDNISVHPAECMQQLLEHVRRHKVNIDGYVCIVMVTTLVLEGWQRKLDP 455

Query: 59  EYNV-SALQSLLFKVDYADS 77
           EY+V   LQSLLFK D+A++
Sbjct: 456 EYDVMHTLQSLLFKADWAET 475


>29933.m001441 ATATH13, putative
          Length = 603

 Score =  128 bits (322), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/91 (64%), Positives = 73/91 (80%), Gaps = 3/91 (3%)

Query: 1   EVENCYNSWRSP--NEVNPAECIQQLLEHVRRHKVNIDGDICIVMVTTLVLEGWQQKLDP 58
           EVE  +  W +P  + ++PAEC+Q+LLE VRRHKVNIDG++C VMVTTLVLEGWQ+KLDP
Sbjct: 513 EVEEAFTFWGTPEGDLIHPAECMQELLEKVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDP 572

Query: 59  EYNV-SALQSLLFKVDYADSLCYTIEGLMAP 88
            YNV   LQ+LL + D+A SL YTI+GLMAP
Sbjct: 573 AYNVMQTLQTLLLRADWAKSLSYTIDGLMAP 603