Jatropha Genome Database

JcCB0284451.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0284451.30 - phase: 1 /partial
         (113 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30072.m000966 5-methyltetrahydropteroyltriglutamate--homocystein...   226   1e-60
29854.m001108 5-methyltetrahydropteroyltriglutamate--homocystein...   226   2e-60

>30072.m000966 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase, putative
          Length = 765

 Score =  226 bits (577), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/113 (96%), Positives = 111/113 (98%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSII+MDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA
Sbjct: 653 FNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 712

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELASAK 113
           DRINKMLAVLE NILWVNPDCGLKTRKYSEVKPAL NMVAAAKLLRT+LASAK
Sbjct: 713 DRINKMLAVLEMNILWVNPDCGLKTRKYSEVKPALSNMVAAAKLLRTQLASAK 765


>29854.m001108 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase, putative
          Length = 815

 Score =  226 bits (575), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 108/113 (95%), Positives = 110/113 (97%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA
Sbjct: 703 FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 762

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELASAK 113
           DRINKMLAVLE NILWVNPDCGLKTRKYSEVKPAL NMVAA K+LRT+LASAK
Sbjct: 763 DRINKMLAVLESNILWVNPDCGLKTRKYSEVKPALSNMVAATKILRTQLASAK 815