Jatropha Genome Database

JcCB0283351.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0283351.10 + phase: 1 /pseudo/partial/short
         (49 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29942.m000747 adenosine diphosphatase, putative                        67   2e-12
29813.m001488 adenosine diphosphatase, putative                        65   9e-12
29950.m001176 adenosine diphosphatase, putative                        46   4e-06

>29942.m000747 adenosine diphosphatase, putative
          Length = 480

 Score = 67.0 bits (162), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/36 (80%), Positives = 32/36 (88%)

Query: 2   EKGVYTWVAVNYALGTLGGDPRETTGIVELGGTSLQ 37
           EKGVY WVA+NYA GTLGGD ++TTGIVELG TSLQ
Sbjct: 206 EKGVYAWVAINYAFGTLGGDAQKTTGIVELGATSLQ 241


>29813.m001488 adenosine diphosphatase, putative
          Length = 532

 Score = 64.7 bits (156), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/36 (72%), Positives = 31/36 (86%)

Query: 2   EKGVYTWVAVNYALGTLGGDPRETTGIVELGGTSLQ 37
           ++GVY W+A NYALG+LGGDP ETTGI+ELGG S Q
Sbjct: 196 DEGVYAWIAANYALGSLGGDPSETTGIIELGGASAQ 231


>29950.m001176 adenosine diphosphatase, putative
          Length = 469

 Score = 45.8 bits (107), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 26/38 (68%)

Query: 2   EKGVYTWVAVNYALGTLGGDPRETTGIVELGGTSLQTA 39
           ++G Y WV +NY LG LG    +T G+V+LGG S+Q A
Sbjct: 192 QEGSYEWVTINYLLGKLGKSYADTVGVVDLGGGSVQMA 229