Jatropha Genome Database

JcCB0282311.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0282311.10 + phase: 0 
         (97 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28124.m000245 Blue copper protein precursor, putative                  96   5e-21
30190.m011064 Blue copper protein precursor, putative                  45   8e-06

>28124.m000245 Blue copper protein precursor, putative
          Length = 183

 Score = 95.5 bits (236), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/71 (69%), Positives = 58/71 (81%)

Query: 5  RRGCGFRSSMMVPVAVVILMVFMVPEVSATRWTVGSNMGWTTNVNYTIWAQDKHFYNGDW 64
          +RGCGF S +++ V  V+LMV M PEVSATRWTVG+NMGW TNVNYTIWA+DKHFYNGDW
Sbjct: 3  KRGCGFVSPLVMMVVAVVLMVAMAPEVSATRWTVGANMGWNTNVNYTIWAKDKHFYNGDW 62

Query: 65 LCKFSFLTIFL 75
          L   S L +F+
Sbjct: 63 LSHISLLPVFV 73


>30190.m011064 Blue copper protein precursor, putative
          Length = 174

 Score = 45.1 bits (105), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 20 VVILMVFMVPEVSATRWTVGSNMGWTTNVNYTIWAQDKHFYNGDWLCKFSFLTIFLLHNV 79
          V+ ++   VP V A    VG   GWTTN NY  WA  K F+  D   K  F     +HNV
Sbjct: 9  VIAILTVSVPLVLAVEHLVGDETGWTTNFNYQSWAAGKEFHVSD---KLVFKYPAGVHNV 65

Query: 80 LK 81
          L+
Sbjct: 66 LR 67