Jatropha Genome Database

JcCB0280701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0280701.10 + phase: 0 
         (229 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30204.m001779 pantoate-beta-alanine ligase, putative                  343   3e-95

>30204.m001779 pantoate-beta-alanine ligase, putative
          Length = 325

 Score =  343 bits (880), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 164/202 (81%), Positives = 179/202 (88%), Gaps = 7/202 (3%)

Query: 2   EPEIITDKTQMRNWSRAIRSQGKTIALVPTMGYLHHGHLSLVEEAKKLANVIVVSIYLNP 61
           EP IITDK  MRNWSRAIRSQGKTIALVPTMGYLH GHLSLV+EA+ LAN+IVVSIY+NP
Sbjct: 6   EPMIITDKENMRNWSRAIRSQGKTIALVPTMGYLHQGHLSLVKEARSLANLIVVSIYVNP 65

Query: 62  GQFSPSEDLSTYPSDFNGDIMKLMSVPGGVNAVFHPQNLYDYEI--DRKNENYNVNFRDS 119
           GQFSPSEDLSTYPSDF+GDI+KLMSVPGGV+ VFHP NLYDY    D KN+N N NFR S
Sbjct: 66  GQFSPSEDLSTYPSDFHGDILKLMSVPGGVDVVFHPHNLYDYYKIDDDKNKNGNSNFRAS 125

Query: 120 GDNCKG-----VVSCVEEKGLGHETWVRVQRLEKGLCGKSRPVFFRGVATVVTKLFNIVE 174
           G+ CK      VVSCVE+KG+GHETWVRV+RLEKG+CGKSRPVFFRGVAT+VTKL NIVE
Sbjct: 126 GEKCKDLEGEKVVSCVEDKGMGHETWVRVERLEKGMCGKSRPVFFRGVATIVTKLLNIVE 185

Query: 175 PDFAVFGKKDYQQWRIIQRMVR 196
           PDFA+FGKKDYQQWRIIQRMVR
Sbjct: 186 PDFAMFGKKDYQQWRIIQRMVR 207