Jatropha Genome Database

JcCB0280191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0280191.10 + phase: 0 /pseudo/partial
         (160 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28830.m000224 cysteine desulfurylase, putative                        179   7e-46

>28830.m000224 cysteine desulfurylase, putative
          Length = 453

 Score =  179 bits (453), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 103/162 (63%), Positives = 113/162 (69%), Gaps = 25/162 (15%)

Query: 1   CELAKKEMEYDDKRIRALQERLLNGIKAKLDGVVVNGSVERRYAGNLNVSFAYVEGESLL 60
           CELAKKEM YDDKRIR LQERLLNGIK KLDGVVVNGSVERRYAGNLN+SFAYVEGESLL
Sbjct: 304 CELAKKEMGYDDKRIRDLQERLLNGIKEKLDGVVVNGSVERRYAGNLNISFAYVEGESLL 363

Query: 61  MGLKDVAVSSGSACTSASLEPSYVLRALG----------**GYGAYFNKV---RHWEVYH 107
           MGLKDVAVSSGSACTSASLEPSYVLRALG            G G +  +    R  E+  
Sbjct: 364 MGLKDVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEIDRAIELTV 423

Query: 108 RRGD**GH*AYSEAGGKVKRNEPAL*DGEGGIDIKQIQWAQH 149
           ++ +            K++   P     + GIDIKQIQWAQH
Sbjct: 424 QQVE------------KLREMSPLYEMVKEGIDIKQIQWAQH 453