Jatropha Genome Database
- JcCB0279501.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0279501.10 - phase: 0
(325 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29656.m000475 conserved hypothetical protein 419 e-117
29986.m001669 conserved hypothetical protein 105 2e-23
30128.m008748 hypothetical protein 95 5e-20
29848.m004523 conserved hypothetical protein 95 6e-20
30170.m013706 conserved hypothetical protein 92 2e-19
29983.m003301 hypothetical protein 87 8e-18
29741.m000146 conserved hypothetical protein 77 8e-15
29686.m000883 conserved hypothetical protein 62 3e-10
30170.m014375 conserved hypothetical protein 54 1e-07
>29656.m000475 conserved hypothetical protein
Length = 338
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/338 (63%), Positives = 237/338 (70%), Gaps = 13/338 (3%)
Query: 1 MATRVTRSRQGLTQQP-EPQSRARWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVM 59
M RVTRSRQ +TQQP E Q RARWTTGLTKIFADL+VDQV KGNKL+NNSFNKKAW +M
Sbjct: 1 MTNRVTRSRQQVTQQPPELQMRARWTTGLTKIFADLMVDQVHKGNKLSNNSFNKKAWNIM 60
Query: 60 CDEFYQKTGLRWDKEQLKNRYSVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYI 119
CDEFY+KTGL WDKEQLKNR+S+M++QH+IVKSL+NQ EF LD STGN+IASNEAWN YI
Sbjct: 61 CDEFYEKTGLNWDKEQLKNRFSIMRKQHAIVKSLLNQSEFHLDESTGNIIASNEAWNRYI 120
Query: 120 KAHPDAEPIRVSGCPIFKQLGVIFSDALXXXXXXXXXXXXXXFPSSVPFERPFSTIRE-- 177
K HPDAEPIR SGCPI+KQLGVIFS+ L PSSV + P I E
Sbjct: 121 KGHPDAEPIRGSGCPIYKQLGVIFSEPLTNGKHVQSVEHEEELPSSVFSKDPLDGIPEKE 180
Query: 178 -------VEPLNTIQXXXXXXXXXXXXXXXXXQEKYQP---XXXXXXXXXXXXXALDSAN 227
EPL TIQ QE QP A+DS
Sbjct: 181 LTTSISFKEPLTTIQEEESSSESEDGDDVADEQEIIQPLPVTHFTTTVMHNTTSAMDSTA 240
Query: 228 AANRKRGRKGIDDXXXXXXXXXXXXXRLRTAAIRQISERYSVADCIKELDAMQGVEEGIY 287
AANRKRGRKGIDD RLRTAAIR++SER+SVADCIKEL+A+QG+EEG+Y
Sbjct: 241 AANRKRGRKGIDDAIAGAILHMAAASRLRTAAIRKVSERFSVADCIKELNAIQGLEEGVY 300
Query: 288 FAALDLFDNPNAREIFLSLKGDKRMIWLRGKCTAHLIS 325
FAALDLFDN NAREIFLSLKGDKRMIWLRGKCT+H IS
Sbjct: 301 FAALDLFDNRNAREIFLSLKGDKRMIWLRGKCTSHPIS 338
>29986.m001669 conserved hypothetical protein
Length = 466
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 76/126 (60%)
Query: 21 RARWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKNRY 80
R WT + + F LL++QV KGNK +++ F+K+AW M F K R++K+ LKNR+
Sbjct: 13 RTVWTPEMDRYFIGLLLEQVSKGNKFDDHLFSKRAWKNMTLLFNTKFKFRYEKDVLKNRH 72
Query: 81 SVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPDAEPIRVSGCPIFKQLG 140
++ ++ VK L++Q F D + V A N+ W+EYIK HPDA R+ P +K L
Sbjct: 73 KTLRNLYTAVKKLLDQNGFSWDNNRQMVTADNDVWDEYIKMHPDARAYRIKTIPHYKDLC 132
Query: 141 VIFSDA 146
+I+ DA
Sbjct: 133 LIYGDA 138
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Query: 19 QSRARWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKN 78
++R W + + F DL+++ ++KGN+++ F K+AW M F K G +D + LKN
Sbjct: 171 RTRTYWQPPMDRYFIDLMLEHMRKGNQIDG-VFRKQAWMDMITSFNAKFGFNYDVDVLKN 229
Query: 79 RYSVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPDAEPIRVSGCPIFKQ 138
RY ++RQH+++K+L+ F D + V A + W +YIK DA P +K
Sbjct: 230 RYKTLRRQHNVIKNLLELPGFSWDDTRQMVTADDYVWQDYIKTRTDARQFMTRPVPYYKD 289
Query: 139 LGVIFSD 145
L +I +D
Sbjct: 290 LCMICND 296
>30128.m008748 hypothetical protein
Length = 1097
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 79/126 (62%), Gaps = 1/126 (0%)
Query: 19 QSRARWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKN 78
++R WT + + F DL++DQ+ +GN++ + +FNK+AWT M + F K G ++D++ LK+
Sbjct: 11 RTRTNWTPVMERYFIDLMLDQMHRGNRMGH-TFNKQAWTDMLNMFNAKFGTKYDRDILKS 69
Query: 79 RYSVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPDAEPIRVSGCPIFKQ 138
Y+ + RQ++ VK+L+ Q F D + VIA + W+ +IK HPD++ + F
Sbjct: 70 HYTNLWRQYNDVKNLLEQNGFSWDDTQKMVIAEDNVWDAFIKTHPDSQSYKRKSLMNFTD 129
Query: 139 LGVIFS 144
+ +I++
Sbjct: 130 MCLIYA 135
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 5 VTRSRQGLTQQPEPQSRARWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFY 64
V GL+ + + WT + F +LL++QV KGNK+ +FN++AW + F
Sbjct: 812 VADDDDGLSLSGYDRPKINWTKSMEVYFIELLLEQVLKGNKIGQ-TFNEQAWAWIIASFN 870
Query: 65 QKTGLRWDKEQLKNRYSVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPD 124
+K GL DK+ +++ Y + ++ + L+NQ+ F D VIA ++ W Y K HP
Sbjct: 871 EKFGLLCDKDDIESWYLSLMEEYYNITDLLNQKGFAWDEIKQAVIADDDDWKSYFKEHPG 930
Query: 125 AEPIRVSGCPIFKQLGVIFSD 145
A R + L +I+ +
Sbjct: 931 ANKYRNRILSSYNDLFMIYGN 951
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 24 WTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKNRYSVM 83
WT + + DLL DQ +GNK+ +AWT M F +K G DK LKNRY +
Sbjct: 340 WTPAMDRYLIDLLQDQALRGNKIGQ-KLTIEAWTEMIRLFTEKFGSHHDKGFLKNRYKHL 398
Query: 84 KRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPDAEPIRVSGCPIFKQLGVIF 143
+ Q++ + L+ Q F D + V A + W+ I+ HPDA R P + +L VIF
Sbjct: 399 RSQYNGINFLLEQNGFSWDENREMVTAEDYIWDSIIEVHPDACSYRNKSVPSYHKLCVIF 458
Query: 144 SD 145
+
Sbjct: 459 GE 460
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
Query: 20 SRARWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKNR 79
SR WT + + F DL++ QV +G K + +S N+ AW M F +K L+ DKE LK
Sbjct: 498 SRTEWTPSMDRYFIDLMLYQVTRGKKTDYSSDNQ-AWIDMAVLFKEKFELKIDKEFLKGY 556
Query: 80 YSVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPDAEPIRVSGCPIFKQL 139
+ + + +K+L+ QR F D + V A ++AW+ Y K +PD R P + L
Sbjct: 557 HISLGNLFNDMKNLLGQRGFSWDETQQLVKAHDDAWDAYAKEYPDIRSYRTKRTPNYNDL 616
Query: 140 GVIFSDA 146
+IF D+
Sbjct: 617 YLIFGDS 623
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Query: 24 WTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKNRYSVM 83
WT + + F +L++DQ++KGNK + +F+K+AW M F +K ++ LK RY +
Sbjct: 176 WTPEMDRCFIELMLDQLKKGNK-RDMAFSKQAWKHMLTLFNEKFCSQYGLSLLKRRYKKL 234
Query: 84 KRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPDAEPIRVSGCPIFKQLGVIF 143
+ +S ++SL + F D +IA + W +YIKAHPDA R ++ L +I+
Sbjct: 235 FKYYSDIRSLRERSGFSWDERQQMIIADDAVWEKYIKAHPDAHLYRKKTLLNYRDLSLIY 294
Query: 144 SDAL 147
+
Sbjct: 295 GNQF 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Query: 21 RARWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKNRY 80
R W+ + + F DL++ V++G+ +N FNK+AW M + + G DK+ LK+R+
Sbjct: 664 RTDWSPLMDRFFIDLMLKHVRQGSMVNL-RFNKQAWYDMVSKIKAEFGSEHDKDVLKSRF 722
Query: 81 SVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPDAEPIRVSGCPIFKQLG 140
+++ +K+L++Q+ F + ++A++ W Y+K +PDA R P + L
Sbjct: 723 MNLRKLFKDMKNLLDQKGFAWNELKQMIVANDNIWKSYVKEYPDARSYRNRTLPNYNDLF 782
Query: 141 VIFSD 145
+IF D
Sbjct: 783 LIFGD 787
>29848.m004523 conserved hypothetical protein
Length = 766
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Query: 13 TQQPEPQSRAR--WTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLR 70
+Q P R+R WT + + F DL+++ + +GN++ + +FNK+AW M F K G +
Sbjct: 6 SQMPTSSDRSRTYWTPTMERFFVDLMLEHMHRGNRIGH-TFNKQAWMDMLAMFNAKFGSQ 64
Query: 71 WDKEQLKNRYSVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPDAEPIRV 130
+DK+ LK+RY+ + +Q + VK+L+ Q F D + V+A + WN Y+K HPDA R
Sbjct: 65 YDKDVLKSRYTNLWKQFNDVKTLLGQSGFTWDETREMVVADDYVWNAYLKVHPDARSYRS 124
Query: 131 SGCPIFKQLGVIF 143
F L I+
Sbjct: 125 KSVLNFNDLCFIY 137
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Query: 21 RARWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKNRY 80
R WT + + F +LL+D + KGNK +N +FNK+AWT M F + G + K L++RY
Sbjct: 180 RTEWTAAMDQYFLELLLDHIVKGNKADN-AFNKQAWTKMLASFNARFGPQHGKRVLRHRY 238
Query: 81 SVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPDAEPIRVSGCPIFKQLG 140
+ + S +K L+ Q F D ++A N+ W+ YIKAHP A R+ P + L
Sbjct: 239 KKLSKYCSDMKYLLKQNGFSWDEMEQMIVADNDVWDAYIKAHPHARAYRMKTLPNYNDLV 298
Query: 141 VIFSDA 146
++F D+
Sbjct: 299 LVFGDS 304
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 3/142 (2%)
Query: 2 ATRVTRSRQGLTQQPEPQSRARWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCD 61
T+ + Q L+ ++R WT + + DLL++QV +GNKL +F +AWT M
Sbjct: 325 GTKTGNASQTLSNND--RTRTYWTPPMDRYLIDLLLEQVHRGNKLGQ-TFISQAWTDMVA 381
Query: 62 EFYQKTGLRWDKEQLKNRYSVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKA 121
F K DK+ LKNRY ++R +S +K+L+ F D++ + A + W+ Y KA
Sbjct: 382 SFNVKFQSHHDKDVLKNRYKHLRRMYSDIKNLLENSGFSWDSTREMITAEDHVWDAYTKA 441
Query: 122 HPDAEPIRVSGCPIFKQLGVIF 143
HPDA RV P +++L IF
Sbjct: 442 HPDARSYRVKTVPGYQKLCAIF 463
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 20 SRARWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKNR 79
S W +++ DL+++QV GNK++ +FN++AWT++ + F +K G+ + + L+NR
Sbjct: 498 STIDWQPPMSRYLIDLMLEQVHGGNKIDY-TFNEQAWTLIVESFNEKFGVLFSRYILENR 556
Query: 80 YSVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPDAEPIR 129
Y + ++ + L++ F D + V A + W YI+ P A R
Sbjct: 557 YITLMKECDDINGLLSHSGFAWDVTQQMVTADDAVWEAYIQGQPHAIAYR 606
>30170.m013706 conserved hypothetical protein
Length = 311
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 5/128 (3%)
Query: 19 QSRARWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKN 78
+SR RWT L KIFADL+V +Q GN+ NN F+KK W + DEF ++T L ++ QL+
Sbjct: 16 RSRKRWTASLDKIFADLVVKHIQLGNR-PNNVFDKKTWNHIRDEFNKQTDLNFNNNQLRK 74
Query: 79 RYSVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPDAEPIRVSGCPIFKQ 138
V++ ++ +KS Q EF ++ S + W E + A P E I+V CPI++Q
Sbjct: 75 HLDVLRTRYYNLKSAFVQNEFTMEDS---CCIGFDLW-EDVGAQPRPEAIKVKDCPIYEQ 130
Query: 139 LGVIFSDA 146
L IF+D
Sbjct: 131 LCAIFTDT 138
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 256 RTAAIRQISERYSVADCIKELDAMQGVEEGIYFAALDLFDNPNAREIFLSLKGDK-RMIW 314
R ++ Q +++++A+CIK LD + V++ +YFAALDLF++PN RE FLSLKGD+ R+ W
Sbjct: 240 RKVSLTQKDKKFTIANCIKALDEIGDVDQQLYFAALDLFEDPNFRETFLSLKGDQLRLTW 299
Query: 315 LRGKC 319
L+GKC
Sbjct: 300 LQGKC 304
>29983.m003301 hypothetical protein
Length = 354
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 62/96 (64%)
Query: 228 AANRKRGRKGIDDXXXXXXXXXXXXXRLRTAAIRQISERYSVADCIKELDAMQGVEEGIY 287
+ RKR RK D ++R AAI + +R+S++ CIK LD MQGV++ Y
Sbjct: 41 SGRRKRSRKATGDAIVDAMLEIAAASKMRAAAILKNEDRFSISKCIKVLDEMQGVDQRTY 100
Query: 288 FAALDLFDNPNAREIFLSLKGDKRMIWLRGKCTAHL 323
F +LDLF+NPNARE F+SLK +KR+ WL+GKC++
Sbjct: 101 FFSLDLFENPNARETFISLKNEKRLPWLQGKCSSSF 136
>29741.m000146 conserved hypothetical protein
Length = 324
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 5 VTRSRQGLTQQPEPQSRARWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFY 64
++ ++ G+ +P +A WT +L ++Q G + N F + + +F
Sbjct: 1 MSAAQDGILGRP----KAEWTPTRDAYLVELFIEQHNCG-RTAYNEFKNEVIKSVTRDFN 55
Query: 65 QKTGLRWDKEQLKNRYSVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPD 124
+ G+ ++ Q+KNRY+VMK+ + +VK+L++ F D + V+A ++ W+ YI +
Sbjct: 56 KNFGMNLEENQIKNRYNVMKKDYGVVKTLLSHSGFRWDETRQMVVADDKVWDSYIAVRTE 115
Query: 125 AEPIRVSGCPIFKQLGVIFSDAL 147
A P R P++KQ+ VIF L
Sbjct: 116 ARPFRRKSFPLYKQMSVIFEGNL 138
>29686.m000883 conserved hypothetical protein
Length = 302
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 24 WTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKNRYSVM 83
W+ + K + L Q + GNK++ FN+ A+T C L + +++ NR +
Sbjct: 22 WSIAMDKCLIEALAVQARNGNKIDK-CFNENAYTAACFAVNSHFNLNLNNQKVVNRLKTI 80
Query: 84 KRQHSIVKSLINQREFCLDASTGNV-IASNEAWNEYIKAHPDAEPIRVSGCPIFKQLGVI 142
K+++ +++ +++Q F + +T + S++ W YI AHPDA+ IR ++ +L ++
Sbjct: 81 KKRYKVIRDMLSQDGFRWNPNTKMIECDSDDLWKRYIAAHPDAKGIRGKQIEMYDELKIV 140
>30170.m014375 conserved hypothetical protein
Length = 321
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 23 RWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKNRYSV 82
+WT + F D LV Q + GN++ +N F A+ M E +K G+ + K+ LKNR
Sbjct: 17 KWTERMDDAFIDALVRQQRLGNRV-DNVFTTAAYDNMLKELREKIGMPFQKDHLKNRLKS 75
Query: 83 MKRQHSIVKSLINQ-REFCLDASTGNVIASNEAWNEYIKAHPDAEPIRVSGCPIFKQLGV 141
+K L N F T EAW ++KA P+A+ + + +L
Sbjct: 76 LKNNFKECFDLFNGVSGFAWTPETKMFSGKPEAWKAFVKAKPEAKKWMTTQIAHYDKLVF 135
Query: 142 IFS 144
+F+
Sbjct: 136 LFA 138