Jatropha Genome Database

JcCB0279231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0279231.10 - phase: 0 /pseudo
         (432 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008851 conserved hypothetical protein                          619   e-178
27894.m000793 conserved hypothetical protein                          253   1e-67
30026.m001470 conserved hypothetical protein                          237   9e-63
29804.m001473 conserved hypothetical protein                          229   2e-60
29751.m001803 conserved hypothetical protein                          179   2e-45
30174.m008838 conserved hypothetical protein                          125   4e-29
30169.m006399 conserved hypothetical protein                           66   3e-11
30190.m011034 conserved hypothetical protein                           52   6e-07

>30174.m008851 conserved hypothetical protein
          Length = 421

 Score =  619 bits (1596), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 297/338 (87%), Positives = 311/338 (92%), Gaps = 1/338 (0%)

Query: 92  EKIQAADKLVISELKNLSELKHFYRENYPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVK 151
           EKIQAADKLVISELKNLSELKHFYRENYPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVK
Sbjct: 66  EKIQAADKLVISELKNLSELKHFYRENYPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVK 125

Query: 152 KFQSEIQNKDSXXXXXXXXXXXATQKRAKLEKNLKLRGLSTKXXXXXXXXNGYYPVDLTP 211
           KFQSEIQNKDS           A+QKR+KLEKNLKLRGLSTK        NGY+PVDLTP
Sbjct: 126 KFQSEIQNKDSEILQLQQHIEEASQKRSKLEKNLKLRGLSTKESEASGDENGYFPVDLTP 185

Query: 212 ELFMTAVEVAFKAIHDFSKPLINMMKAAGWDLDAAANSIEPDVVYAKRAHKKYAFESHIC 271
           ELF++AVE +FKAIHDFSKPLINMMKAAGWDLDAAANSIEPDVVYAKRAHKKYAFESHIC
Sbjct: 186 ELFISAVEASFKAIHDFSKPLINMMKAAGWDLDAAANSIEPDVVYAKRAHKKYAFESHIC 245

Query: 272 QRMFSGFQQESFSIKSDNVMVSRESFFHQYLALREMDPLDVLGQDPDSDFGKFCRSKYLV 331
           QRMFSGFQQESFSIKSD+V  S+ESFF QYLAL+EMDPLDVLGQ+PDS FGKFCRSKYLV
Sbjct: 246 QRMFSGFQQESFSIKSDDVTFSKESFFPQYLALKEMDPLDVLGQNPDSSFGKFCRSKYLV 305

Query: 332 VVHPKMEGSFFGNLDQRNYVMGGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPNVKVFQV 391
           VVHPKME SFFGNLDQRNY+MGGGHPRTPFYQAFLKLAKSIWLLH LA+SFDPNVKVFQV
Sbjct: 306 VVHPKMEASFFGNLDQRNYIMGGGHPRTPFYQAFLKLAKSIWLLHMLAFSFDPNVKVFQV 365

Query: 392 RRGSEFSEVYMESIVKNLILDENQKPRVGLMVMPGFGW 429
           +RGSEFSEVYMES+VKNLILDENQKPRVGLMVMPGF W
Sbjct: 366 KRGSEFSEVYMESVVKNLILDENQKPRVGLMVMPGF-W 402


>27894.m000793 conserved hypothetical protein
          Length = 466

 Score =  253 bits (646), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 148/342 (43%), Positives = 205/342 (59%), Gaps = 18/342 (5%)

Query: 94  IQAADKLVISELKNLSELKHFYRENYPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKF 153
           IQAAD+LV+SELKNLSELK  Y +    P   SP  + + AE+QEQ+S+ KTYE+M  K 
Sbjct: 111 IQAADQLVVSELKNLSELKQCYIKKQFDP---SPDTTMVLAELQEQKSVSKTYEIMGNKL 167

Query: 154 QSEIQNKDSXXXXXXXXXXXATQKRAKLEKNLKLRGLSTKXXXXXXXXNGYYPVDLTPEL 213
           +S+++ KDS           +++    L+K L   G            +  +   L+P  
Sbjct: 168 ESQLRLKDSEIMYLREKLEESSRHNQLLDKRLNRSG-------QLSVLDNLHQSRLSPSH 220

Query: 214 FMTAVEVAFKAIHDFSKPLINMMKAAGWDLDAAANSIEPDVVYAKRAHKKYAFESHICQR 273
           F   V    K+I  F K +I+ MKAA WDLDAAANSI PDVVY +   K +AFES +C+ 
Sbjct: 221 FTAVVRFTVKSIQSFVKLMIDQMKAADWDLDAAANSIVPDVVYWRADDKCFAFESFVCRE 280

Query: 274 MFSGFQQESFSIKSDNVMVSRES----FFHQYLALREMDPLDVLGQDPDSDFGKFCRSKY 329
           +F GF   +FS+ S++ ++ R++    FF ++  LR +   D L Q P S F KFCR+KY
Sbjct: 281 IFDGFHLPNFSLPSESSLLERKNQNQLFFKRFTELRSVKAKDYLAQKPKSTFAKFCRAKY 340

Query: 330 LVVVHPKMEGSFFGNLDQRNYVMGGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPNVKVF 389
           L +VHP+ME SFFGNL QR+ V  GG P T F+ +F +LAK +W+LH LA+SF+P   +F
Sbjct: 341 LQLVHPQMETSFFGNLSQRSLVNSGGFPDTTFFTSFSELAKRVWILHCLAFSFEPEASIF 400

Query: 390 QVRRGSEFSEVYMESIVKNLILD----ENQKPRVGLMVMPGF 427
           QV +G  FSEVYME + ++ +L     +   P V   V PGF
Sbjct: 401 QVSKGCRFSEVYMECVAEDALLSSGNAQEADPPVAFTVFPGF 442


>30026.m001470 conserved hypothetical protein
          Length = 465

 Score =  237 bits (604), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 134/344 (38%), Positives = 198/344 (57%), Gaps = 18/344 (5%)

Query: 92  EKIQAADKLVISELKNLSELKH-FYRENYPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMV 150
           + IQAAD+ V+ ELK LSELK  F++ +      +SPQ + + AEIQEQQS++KTYE+ +
Sbjct: 110 DAIQAADRAVVEELKLLSELKRSFFKNDLDH---LSPQVTVMLAEIQEQQSMMKTYEITI 166

Query: 151 KKFQSEIQNKDSXXXXXXXXXXXATQKRAKLEKNLKLRGLSTKXXXXXXXXNGYYPVDLT 210
           KK +SE + K S           +      LEK L   G            N  + V L 
Sbjct: 167 KKLESETEVKVSDISLLKKKLDESIAYNKSLEKTLNASG------PLSMFDNIQFSV-LN 219

Query: 211 PELFMTAVEVAFKAIHDFSKPLINMMKAAGWDLDAAANSIEPDVVYAKRAHKKYAFESHI 270
           P  F+  +  A +++  F K ++  M+ A WD++AA N+IEPD  ++K  H+ + FES +
Sbjct: 220 PTHFVQFLHSALRSMRSFVKMMVREMEIARWDIEAATNAIEPDSSFSKPTHRCFVFESFV 279

Query: 271 CQRMFSGFQQESFSIKSD----NVMVSRESFFHQYLALREMDPLDVLGQDPDSDFGKFCR 326
            + MF GF   +F + ++    N     E +F+++  L+  +P   L Q+P S F +F R
Sbjct: 280 SKTMFEGFNHPNFMLPNETPPQNNHYHSEHYFNKFKKLKSANPKPYLTQNPTSSFARFTR 339

Query: 327 SKYLVVVHPKMEGSFFGNLDQRNYVMGGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPNV 386
           +KYL +VH KME S FGNL+QR  V  GG P + F+ AFL++A+ +W L+ LA+SF  +V
Sbjct: 340 AKYLQLVHAKMECSLFGNLNQRKLVNSGGLPESAFFTAFLEMARRVWCLNLLAFSFGESV 399

Query: 387 KVFQVRRGSEFSEVYMESIVKNLILDE---NQKPRVGLMVMPGF 427
            +FQV + S FSEVYMES+    +LD    +   RVG  V+PGF
Sbjct: 400 SIFQVSKNSRFSEVYMESVTHESVLDTDGVDADLRVGFTVVPGF 443


>29804.m001473 conserved hypothetical protein
          Length = 441

 Score =  229 bits (583), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 127/336 (37%), Positives = 192/336 (57%), Gaps = 33/336 (9%)

Query: 92  EKIQAADKLVISELKNLSELKHFYRENYPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVK 151
           +KI AAD+ ++ +L+ L ++K  Y+E           DS+L +   + ++ ++  E +++
Sbjct: 124 DKIVAADENIVVQLEALCKIKRTYKEK-------RFIDSKLGSCHSDLRTKIEVNERLLE 176

Query: 152 KFQSEIQNKDSXXXXXXXXXXXATQKRAKLEKNLKLRGLSTKXXXXXXXXNGYYPVDLTP 211
           K +S+ + KD+                A L + ++ + L  K               L  
Sbjct: 177 KLKSQNRAKDAEIARLRQQLHDLDSGTAILVEKMRQKSLEIKNRRI-----------LNI 225

Query: 212 ELFMTAVEVAFKAIHDFSKPLINMMKAAGWDLDAAANSIEPDVVYAKRAHKKYAFESHIC 271
            +F    ++A K+IHDF+KP+I++MKA+GWDL+ AANSIE  VVY +R+ KKYAFE++I 
Sbjct: 226 AMFEDTFKMASKSIHDFAKPMISLMKASGWDLNLAANSIESGVVYFRRSDKKYAFEAYIA 285

Query: 272 QRMFSGFQQESFSIKSDNVMVSRESFFHQYLALREMDPLDVLGQDPDSDFGKFCRSKYLV 331
           +RMF G   +S+++                  +R  DP++ L +D  S F  FCR KYL 
Sbjct: 286 RRMFHGIALKSYNVNG---------------VMRYDDPINSLIEDSSSGFSSFCRKKYLF 330

Query: 332 VVHPKMEGSFFGNLDQRNYVMGGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPNVKVFQV 391
           VVHP ME SFFGNLDQR +V+ G HPRTPFYQ F ++AK +W+L  +A S DPN +++ V
Sbjct: 331 VVHPMMEMSFFGNLDQRLFVLSGKHPRTPFYQIFARMAKWVWVLQGIATSVDPNAEMYAV 390

Query: 392 RRGSEFSEVYMESIVKNLILDENQKPRVGLMVMPGF 427
            RGS FS++YME I  ++        +V  MVMPGF
Sbjct: 391 NRGSIFSDIYMEPIQADIPNRGQSDSKVEFMVMPGF 426


>29751.m001803 conserved hypothetical protein
          Length = 412

 Score =  179 bits (454), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 178/366 (48%), Gaps = 42/366 (11%)

Query: 92  EKIQAADKLVISELKNLSELKHFYRENYPKPVCVSPQDSRLAAEIQEQ-------QSLLK 144
           E+++ AD  V+SEL+ L     F RE + + V VS   S   A  +         + ++ 
Sbjct: 41  ERMRVADVAVVSELRKLG----FLREKFKRCVSVSVTISGGGARRKRFGGGGGMLREVVA 96

Query: 145 TYEVMVKKFQSEIQNKDSXXXXXXXXXXXATQKRAKLEKNLKLRGLS-TKXXXXXXXXNG 203
            YE  V++ + E+++++             +   +        +G S +K          
Sbjct: 97  PYEAAVEELKKEVKSREVEVENLKEKIKCLS---SSFNNGSGKKGKSFSKRKVNCSLAAT 153

Query: 204 YYPVDLTPELFMTAVEVAFKAIHDFSKPLINMMKAAGWDLDAAANSIEPDVVYAKRA--- 260
              +   P+LF   +    +    F+  L+++M++A WD+ AA  SIE            
Sbjct: 154 QVALAPAPDLFEATMSQVKETSKSFTSLLLSLMRSAHWDIAAAVRSIEAAAATNNNINTT 213

Query: 261 ---------HKKYAFESHICQRMFSGFQQESFSIKSDNVMVS-------RESFFHQYLAL 304
                    H KYA ES+I +++F GF  E+F +  D  + S       R   F QY  +
Sbjct: 214 AIASTIITHHAKYALESYISRKIFQGFDHETFYM--DGSLSSLLNPDQFRRDCFTQYRDM 271

Query: 305 REMDPLDVLGQDPDSDFGKFCRSKYLVVVHPKMEGSFFGNLDQRNYVMGGGHPRTPFYQA 364
           + MDP+++LG  P   FGKFC  KY+ +VHPKME S FGNL+QR  V+ G HPR+ FY  
Sbjct: 272 KAMDPVELLGILPTCHFGKFCFKKYVAIVHPKMEESLFGNLEQRQQVLDGSHPRSQFYAE 331

Query: 365 FLKLAKSIWLLHRLAYSFDPNVKVFQVRRGSEFSEVYMESIVKNLILDENQKPR---VGL 421
           FL LAK+IWLLH LA+S DP    F+  RG+EF   YMES+VK       + P    VG 
Sbjct: 332 FLGLAKAIWLLHLLAFSLDPPPSQFEASRGAEFHPQYMESVVK---FSGGRIPAGQVVGF 388

Query: 422 MVMPGF 427
            V PGF
Sbjct: 389 PVSPGF 394


>30174.m008838 conserved hypothetical protein
          Length = 429

 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 13/166 (7%)

Query: 274 MFSGFQQESFSIKSD------------NVMVSRESFFHQYLALREMDPLDVLGQDPDSDF 321
           MF GF  + F ++ D            + M ++ S   Q L      P++++ ++P  +F
Sbjct: 231 MFRGFDLKGFGLEEDVDAEILGNGHNSDSMKTKGSL-KQLLEHVSSSPVELISRNPGCEF 289

Query: 322 GKFCRSKYLVVVHPKMEGSFFGNLDQRNYVMGGGHPRTPFYQAFLKLAKSIWLLHRLAYS 381
            KFC  KY  +VHP ME S F NLD    V+      + FY++F+ +A S+W LH+LA+S
Sbjct: 290 SKFCEKKYQELVHPTMESSIFSNLDHNEVVLNSWRSLSIFYESFVNMASSVWTLHKLAFS 349

Query: 382 FDPNVKVFQVRRGSEFSEVYMESIVKNLILDENQKPRVGLMVMPGF 427
           FDP  ++FQV RG +FS VYME + +   L    + +VG  V+PGF
Sbjct: 350 FDPVAEIFQVERGVDFSMVYMEDVTRRCTLPAKARMKVGFTVVPGF 395


>30169.m006399 conserved hypothetical protein
          Length = 598

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 35/231 (15%)

Query: 212 ELFMTAVEVAFKAIHDFSKPLINMMKAA-GWDLDAAANSIEPDVVYAKRAHKK---YAFE 267
           E F+  V  A  ++  F K L+  ++   G  +D     +EP  +     + K   Y  E
Sbjct: 368 EGFLQIVSEARLSVKQFCKTLVGQIEETDGTLMDNLNLLLEPYKLSLNSRYSKAVLYHLE 427

Query: 268 SHICQRMFSGFQ----QESFSIKSDNVMVSRESFFHQYLALREMDPLDVLGQDP---DSD 320
           + I Q ++  F+    Q++ S K  +    R++ F  ++ LR +   +VL +       +
Sbjct: 428 AIINQSLYQDFENSVFQKNGSPKHLDPQQDRQAHFASFVGLRNLSWNEVLRKGTKYYSEE 487

Query: 321 FGKFCRSKYLVVVHPKMEGSFFGNLDQRNYVMGGGHP-RTPFYQAFLKLAKSIWLLHRLA 379
           F KFC  K   ++                  M    P      QAF   AK IWLLH LA
Sbjct: 488 FSKFCDQKMSCII----------------TTMNWTRPWPEALLQAFFVSAKCIWLLHLLA 531

Query: 380 YSFDPNVKVFQVRRGSEFSEVYMESIVKNLILDENQK---PRVGLMVMPGF 427
           +SF+P++ + ++     F   YME    ++ +D  +     RV +MVMPGF
Sbjct: 532 FSFNPSLGILRIEENRSFDPHYME----DMFMDRQRSHGPSRVKIMVMPGF 578


>30190.m011034 conserved hypothetical protein
          Length = 481

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 36/232 (15%)

Query: 212 ELFMTAVEVAFKAIHDFSKPLINMMKAAGWDL-DAAANSIEP-DVVYAKRAHKK---YAF 266
           ELF+ +V  A  ++   S+ L   ++  G  + +  +  ++P DV  +   + K   +  
Sbjct: 231 ELFLVSVSEARSSVRLLSRSLTMQLRHMGGRVFERISVLLQPYDVKISSSKNPKSILFYL 290

Query: 267 ESHICQRMFSGFQQESFSIKSDNVMVSR----ESFFHQYLALREMDPLDVLGQDP---DS 319
           E+ + +  F  F+   F   S N +++     E+ +  +  L+E+   +VL +       
Sbjct: 291 EALLNKTFFEDFESVGFQKSSINSILNPIDRCEANYASFNVLKELTWEEVLSKGTRHFSE 350

Query: 320 DFGKFCRSKYLVVVHPKMEGSFFGNLDQRNYVMGGGHPRTPFYQAFLKLAKSIWLLHRLA 379
           +F KFC  K   +V      +  G             P  P  QAF   ++++WL+H LA
Sbjct: 351 EFSKFCDRKMNEIV------AMLG--------WNRAWPE-PLLQAFFGASRNVWLVHLLA 395

Query: 380 YSFDPNVKVFQVRRGSEFSEVYMESI----VKNLILDENQKPRVGLMVMPGF 427
            S  P + +F+V +   F  VYME +     K L+        V +MV PGF
Sbjct: 396 NSVHPGLPIFRVDKWVRFDSVYMEDMGGDRAKKLV-----PTIVRIMVAPGF 442