Jatropha Genome Database

JcCB0279151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0279151.10 - phase: 0 
         (69 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m010913 conserved hypothetical protein                           72   6e-14
29929.m004632 conserved hypothetical protein                           62   4e-11
30147.m014485 conserved hypothetical protein                           59   6e-10
30190.m010911 conserved hypothetical protein                           55   7e-09

>30190.m010913 conserved hypothetical protein
          Length = 69

 Score = 71.6 bits (174), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 43/69 (62%)

Query: 1  MADWAXXXXXXXXXXXXXXXXXXQLPGSTRHVEFGSFKTNGKAIVVHTVIFFSVFTILIL 60
          MADW                   Q+PG++R +EFGS KTNGKAI VHT+IFF+++ ILIL
Sbjct: 1  MADWGPVLIGVVLFLLLTPGLLFQIPGNSRTLEFGSLKTNGKAIAVHTLIFFTLYAILIL 60

Query: 61 AVRVRIYTG 69
          AV V IY G
Sbjct: 61 AVHVHIYAG 69


>29929.m004632 conserved hypothetical protein
          Length = 69

 Score = 62.4 bits (150), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 41/69 (59%)

Query: 1  MADWAXXXXXXXXXXXXXXXXXXQLPGSTRHVEFGSFKTNGKAIVVHTVIFFSVFTILIL 60
          MADW                   QLPG  R VEFG+ +T+G +I+VHT+IFF++ TI ++
Sbjct: 1  MADWGPVVIAVVLFVLLSPGLLFQLPGKGRVVEFGNMQTSGLSILVHTIIFFALVTIFLI 60

Query: 61 AVRVRIYTG 69
          A+ V IYTG
Sbjct: 61 AIGVHIYTG 69


>30147.m014485 conserved hypothetical protein
          Length = 69

 Score = 58.5 bits (140), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 38/69 (55%)

Query: 1  MADWAXXXXXXXXXXXXXXXXXXQLPGSTRHVEFGSFKTNGKAIVVHTVIFFSVFTILIL 60
          MADW                   Q+PG  R VEFG+  T+G +IVVH +I+F + TIL++
Sbjct: 1  MADWGPVIIAVILFVLLTPGLLFQIPGRNRVVEFGNMHTSGASIVVHAIIYFGLITILLI 60

Query: 61 AVRVRIYTG 69
          A+ + IY G
Sbjct: 61 AIGIHIYAG 69


>30190.m010911 conserved hypothetical protein
          Length = 69

 Score = 55.1 bits (131), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%)

Query: 1  MADWAXXXXXXXXXXXXXXXXXXQLPGSTRHVEFGSFKTNGKAIVVHTVIFFSVFTILIL 60
          MADW                   QLPG++R VEF + +T+G ++ VHT+IFF + TI ++
Sbjct: 1  MADWGPVVIAVVLFVVLSPGVLFQLPGNSRVVEFANLQTSGVSVFVHTIIFFGLITIFLI 60

Query: 61 AVRVRIYTG 69
          A+ V I TG
Sbjct: 61 AIGVHITTG 69