Jatropha Genome Database

JcCB0279091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0279091.10 + phase: 0 
         (102 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29596.m000699 mads box protein, putative                               96   3e-21
30174.m008934 mads box protein, putative                               95   7e-21
29804.m001536 mads box protein, putative                               94   1e-20
29648.m001978 mads box protein, putative                               94   2e-20
30138.m003939 mads box protein, putative                               91   1e-19
30147.m014133 mads box protein, putative                               90   3e-19
30221.m002218 mads box protein, putative                               89   3e-19
29838.m001690 mads box protein, putative                               89   5e-19
29907.m000663 mads box protein, putative                               86   5e-18
29782.m000119 Floral homeotic protein DEFICIENS, putative              85   7e-18
29908.m005982 mads box protein, putative                               84   9e-18
30170.m013776 mads box protein, putative                               82   6e-17
29693.m002039 mads box protein, putative                               75   6e-15
28348.m000077 mads box protein, putative                               75   8e-15
30138.m004061 mads box protein, putative                               74   2e-14
29813.m001508 mads box protein, putative                               74   2e-14
30099.m001672 mads box protein, putative                               69   4e-13
27866.m000233 mads box protein, putative                               69   5e-13
29693.m002042 mads box protein, putative                               69   6e-13
29693.m002041 mads box protein, putative                               68   9e-13
29613.m000367 mads box protein, putative                               67   2e-12
30099.m001671 mads box protein, putative                               64   1e-11
28830.m000229 mads box protein, putative                               64   2e-11
29739.m003627 mads box protein, putative                               62   6e-11
29838.m001672 mads box protein, putative                               61   1e-10
29912.m005524 mads box protein, putative                               56   3e-09
27893.m000228 mads box protein, putative                               52   7e-08
28180.m000391 mads box protein, putative                               49   5e-07
29653.m000299 mads box protein, putative                               49   7e-07
30190.m010925 conserved hypothetical protein                           48   9e-07

>29596.m000699 mads box protein, putative
          Length = 262

 Score = 96.3 bits (238), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 53/57 (92%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          MGRGKI I++I+N  SRQVTFSKRR+GL+KKAKEL++LCDAEV V++FSSTGKLY+F
Sbjct: 1  MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFSSTGKLYDF 57


>30174.m008934 mads box protein, putative
          Length = 244

 Score = 94.7 bits (234), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 53/57 (92%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          MGRG++E+K+IEN  +RQVTFSKRR+GL+KKA ELSVLCDAEVA+I+FSS GKLYEF
Sbjct: 1  MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF 57


>29804.m001536 mads box protein, putative
          Length = 266

 Score = 94.0 bits (232), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 52/57 (91%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          MGRGKI I++I+N  SRQVTFSKRR+GL+KKA+ELS+LCDAEV VI+FSST KLY++
Sbjct: 28 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGVIIFSSTSKLYDY 84


>29648.m001978 mads box protein, putative
          Length = 234

 Score = 93.6 bits (231), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 56/57 (98%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          MGRG+IEIK+IEN ++RQVT+SKRR+G+IKKAKE++VLCDAEV++I+F+S+GK++E+
Sbjct: 1  MGRGRIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAEVSLIIFASSGKMHEY 57


>30138.m003939 mads box protein, putative
          Length = 244

 Score = 90.9 bits (224), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 53/57 (92%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          MGRG++++K+IEN  +RQVTFSKRR+GL+KKA E+SVLCDAEVA+IVFS+ GKL+E+
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSTKGKLFEY 57


>30147.m014133 mads box protein, putative
          Length = 213

 Score = 89.7 bits (221), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 50/57 (87%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          M RGKI++++IEN  SRQVTFSKRR+GL+KKA ELSVLCDAEVAVI+FS  G+L EF
Sbjct: 1  MVRGKIQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLSEF 57


>30221.m002218 mads box protein, putative
          Length = 233

 Score = 89.4 bits (220), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 50/57 (87%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          MGRGKI IK+IEN  +RQVTFSKRR+GL+KK  ELSVLCDA++ +I+FSSTGK+ ++
Sbjct: 1  MGRGKIPIKRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKMCQY 57


>29838.m001690 mads box protein, putative
          Length = 61

 Score = 88.6 bits (218), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 50/57 (87%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          M R KI+IKKI+N+ +RQVTFSKRR GL KKA ELS LCDAE+A++VFS+TGKL+E+
Sbjct: 1  MTRQKIQIKKIDNITARQVTFSKRRRGLFKKAYELSTLCDAEIALLVFSATGKLFEY 57


>29907.m000663 mads box protein, putative
          Length = 205

 Score = 85.5 bits (210), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 38/57 (66%), Positives = 48/57 (84%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          M RGK+++K+IEN   RQVTF KRRSGL+KKAKELSVLCDAE+ + +FS+ GKLY+ 
Sbjct: 1  MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGLFIFSAHGKLYDL 57


>29782.m000119 Floral homeotic protein DEFICIENS, putative
          Length = 235

 Score = 85.1 bits (209), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 40/58 (68%), Positives = 53/58 (91%), Gaps = 1/58 (1%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTG-KLYEF 57
          MGRGKIEIKKIEN  +RQVT+SKRR+G+ KKA+EL+VLCDA+V++I+FS++G K +EF
Sbjct: 1  MGRGKIEIKKIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNSGRKFHEF 58


>29908.m005982 mads box protein, putative
          Length = 347

 Score = 84.3 bits (207), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/57 (66%), Positives = 49/57 (85%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          MGR K+EIK+IEN  +RQVTFSKRR+GLIKKA ELS+LCD ++A+I+FS +G+L  F
Sbjct: 1  MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHF 57


>30170.m013776 mads box protein, putative
          Length = 230

 Score = 82.0 bits (201), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 49/57 (85%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          MGR K++IK+IEN  +RQVTFSKRR+GLIKKA ELSVLCD +VA+I+FS +G+L  F
Sbjct: 1  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRLSLF 57


>29693.m002039 mads box protein, putative
          Length = 172

 Score = 75.1 bits (183), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 46/57 (80%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          MGR KIE+K +++ +SRQVTFSKRR+GL KKA EL+ LC A++A++VFS  GK + F
Sbjct: 1  MGRRKIEMKMVKDTSSRQVTFSKRRTGLFKKANELATLCAAQIAIVVFSPGGKPFSF 57


>28348.m000077 mads box protein, putative
          Length = 215

 Score = 74.7 bits (182), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 35/54 (64%), Positives = 44/54 (81%)

Query: 2  GRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLY 55
          GR KIEIKK+EN+N R VTFSKR+ G+ KKA ELS LC AE+AV++FS  GK++
Sbjct: 17 GRQKIEIKKLENVNRRYVTFSKRKHGIFKKATELSTLCGAEIAVVLFSGHGKVF 70


>30138.m004061 mads box protein, putative
          Length = 363

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/53 (58%), Positives = 47/53 (88%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGK 53
          MGR K++IK++E+ ++RQVT+SKRR+G++KKAKELS+LCD  + +++FS TGK
Sbjct: 1  MGRVKLKIKRLESTSNRQVTYSKRRNGILKKAKELSILCDIHIVLLMFSPTGK 53


>29813.m001508 mads box protein, putative
          Length = 360

 Score = 73.6 bits (179), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/53 (60%), Positives = 44/53 (83%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGK 53
          MGR K++IKK+EN N RQ T+ KR+ G+IKKAKELS+LCD ++ +++FS TGK
Sbjct: 1  MGRVKLKIKKLENTNGRQATYGKRKHGIIKKAKELSILCDIDIILLMFSPTGK 53


>30099.m001672 mads box protein, putative
          Length = 217

 Score = 68.9 bits (167), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 34/56 (60%), Positives = 43/56 (76%)

Query: 2  GRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          GR KI++ K+ N ++ QVTFSKRRSGL KKA ELS LC AE+A+IVFS   K++ F
Sbjct: 7  GRQKIDMVKMPNESNLQVTFSKRRSGLFKKASELSTLCGAEIAIIVFSPGKKVFSF 62


>27866.m000233 mads box protein, putative
          Length = 217

 Score = 68.6 bits (166), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/56 (62%), Positives = 43/56 (76%)

Query: 2  GRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          GR KIEIK IE  ++ QVTFSKRR+GL KKA ELS+LC A+VAV+ FS   K++ F
Sbjct: 13 GRQKIEIKPIEGKSNLQVTFSKRRAGLFKKASELSLLCGAQVAVLAFSPGKKVFAF 68


>29693.m002042 mads box protein, putative
          Length = 220

 Score = 68.6 bits (166), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 40/56 (71%)

Query: 2  GRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          GR KI +K+IEN   R +TFSKRRSG+ KKA EL  LC AEV ++VFS  GK + F
Sbjct: 9  GRQKITMKRIENEEDRLITFSKRRSGIYKKASELITLCGAEVGILVFSPAGKPFSF 64


>29693.m002041 mads box protein, putative
          Length = 239

 Score = 67.8 bits (164), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 41/56 (73%)

Query: 2  GRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          GR KIE+KKIEN + R +TFSKRRSG+ KKA EL  L  AE+A +V+S  GK + F
Sbjct: 12 GRQKIEMKKIENEDDRLITFSKRRSGIYKKASELVTLTGAELAFLVYSPAGKPFSF 67


>29613.m000367 mads box protein, putative
          Length = 183

 Score = 66.6 bits (161), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/57 (57%), Positives = 40/57 (70%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          +GR KI I+KI   +  QVTFSKRR+GL KKA EL  LC  E+A+IVFS  GK + F
Sbjct: 6  LGRQKIAIEKISKKSHLQVTFSKRRAGLFKKASELCTLCGVEIAIIVFSPAGKAFSF 62


>30099.m001671 mads box protein, putative
          Length = 226

 Score = 63.9 bits (154), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 38/57 (66%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          +GR KI I+KI      QVTFSKRR+GL KKA EL  LC  E+A++VFS   K + F
Sbjct: 26 LGRQKIAIEKISKKTHLQVTFSKRRAGLFKKASELCTLCGVEIAILVFSPANKAFSF 82


>28830.m000229 mads box protein, putative
          Length = 197

 Score = 63.5 bits (153), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 40/57 (70%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          MGR K ++  I+  ++RQV+FSKRR+G+ KKA EL  LC  E AV++FS  GK + F
Sbjct: 1  MGRKKTQMSLIQGESARQVSFSKRRTGIFKKASELCTLCAVEAAVVIFSPGGKAFTF 57


>29739.m003627 mads box protein, putative
          Length = 62

 Score = 62.0 bits (149), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 43/53 (81%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGK 53
          MGR K++I ++E++ +RQV +SKR+ G++KK KEL+ LCD ++ +I+FS +GK
Sbjct: 1  MGRRKLKILRLESVKARQVKYSKRKLGVLKKGKELATLCDVDLGLIMFSPSGK 53


>29838.m001672 mads box protein, putative
          Length = 207

 Score = 60.8 bits (146), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 40/56 (71%)

Query: 2  GRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGKLYEF 57
          GR +IE+ KI   ++R VTFSKRR G+ KKA ELS LC AE+++IVFS   + + F
Sbjct: 8  GRQRIEMVKISKESNRLVTFSKRRYGVFKKASELSTLCGAEISIIVFSPGKRAFSF 63


>29912.m005524 mads box protein, putative
          Length = 338

 Score = 56.2 bits (134), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/49 (46%), Positives = 34/49 (69%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFS 49
          MGRGK+ ++ I N  SR +T+ KR+ GL KK +E  +LCD +  +I+FS
Sbjct: 1  MGRGKLNMELISNEKSRMITYHKRKKGLTKKVQEFHILCDVDACIIIFS 49


>27893.m000228 mads box protein, putative
          Length = 349

 Score = 51.6 bits (122), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/49 (51%), Positives = 35/49 (71%)

Query: 5  KIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGK 53
          K  +KK+E+   R V+F+KRR+GL  KA EL +LCDA++AV+V S   K
Sbjct: 6  KRPMKKLESQKQRSVSFTKRRNGLFNKAAELFMLCDAQLAVLVASPCSK 54


>28180.m000391 mads box protein, putative
          Length = 328

 Score = 48.9 bits (115), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 5  KIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTG-KLYEF 57
          K+ +KK E    R V+F+KRR GL  KA EL +LCDA++A++V S    K+Y F
Sbjct: 6  KLPMKKRETKKQRSVSFTKRRYGLFNKAAELFMLCDAQLALLVSSPCSRKVYSF 59


>29653.m000299 mads box protein, putative
          Length = 166

 Score = 48.5 bits (114), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 3/56 (5%)

Query: 5  KIEIKKI-ENLNSRQVTFSKRRSGLIKKAKELSVL--CDAEVAVIVFSSTGKLYEF 57
          KIEIKKI +N     VTFSKRR+GL KKA E   L    AEVA+I FS +G+ + F
Sbjct: 29 KIEIKKIQDNKTGLIVTFSKRRTGLFKKAMEFCNLDGGGAEVALITFSPSGRPFSF 84


>30190.m010925 conserved hypothetical protein
          Length = 386

 Score = 48.1 bits (113), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 34/53 (64%)

Query: 1  MGRGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELSVLCDAEVAVIVFSSTGK 53
          MG  +I+++ IE  ++R +T+ KR+  L+KK  E S+LC  E  +I+F+   K
Sbjct: 1  MGHSRIKMELIEKESTRMLTYQKRKKSLVKKVSEFSILCGVEACLIIFAPKHK 53