Jatropha Genome Database

JcCB0273441.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0273441.20 - phase: 0 /pseudo
         (429 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29801.m003085 Methylthioribose kinase, putative                       654   0.0  

>29801.m003085 Methylthioribose kinase, putative
          Length = 424

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/429 (74%), Positives = 349/429 (81%), Gaps = 11/429 (2%)

Query: 1   MAFSEFRPLDENALVEYIKATPVLSNKIGNEFDNLEVKEVGDGNLNFVYIVIGSAGSFVI 60
           MAFSEFRPLDE +L+EYI+ TPVL+NKIG++FD+L++KEVGDGNLNFVYIV+ S GSFVI
Sbjct: 1   MAFSEFRPLDEKSLIEYIRGTPVLANKIGDKFDDLKIKEVGDGNLNFVYIVVSSDGSFVI 60

Query: 61  KQALPYIRCIGESWPMTKERAYFEGRALKEHGKLSPEHVPEVYHFDRTMSLIAMRYLEPP 120
           KQALPYIRCIGESWPMTKERAYFE R LKEHG+L PEHVP+VYHFD TM LI MRYLEPP
Sbjct: 61  KQALPYIRCIGESWPMTKERAYFEARTLKEHGRLCPEHVPDVYHFDHTMCLIGMRYLEPP 120

Query: 121 HIILRKGLIAGVKYPHLAEHISDYMARXXXXXXXXXXXXXEHKRVVAEFCGNVELCRLTE 180
           HIILRKGLI G +YPHLAEH+SDYMA+             EHKR VAEFCGNVELCRLTE
Sbjct: 121 HIILRKGLIGGHEYPHLAEHMSDYMAKTLFYTSLLYLTTTEHKRAVAEFCGNVELCRLTE 180

Query: 181 QVVFSDPYKVSEYNRWTSPYLDQDAVAVREDNILKLEVAELKSRFCEQAQALIHGDLHTG 240
           QVVFSDPYKVS+YN WTSPYLD DA AVREDNILKLE+AELKS+FCE+ QALIHGDLHTG
Sbjct: 181 QVVFSDPYKVSQYNHWTSPYLDHDAEAVREDNILKLEIAELKSKFCERGQALIHGDLHTG 240

Query: 241 SVMVTSSSTQVIDPEFAFYGPMGFDIGAFIGNLILAYFSQDGHASPVDDRKFISESHILM 300
           SVMVT SSTQVIDPEF+FYGPMGFDIGAFIGNLILAYF+Q GHA   +DRK         
Sbjct: 241 SVMVTPSSTQVIDPEFSFYGPMGFDIGAFIGNLILAYFAQAGHADSANDRK--------- 291

Query: 301 QSYKEWILKTIEETWNLFYKKFIGLWDEHKDGPGEAYLPAIYNNPEVRQLVQENFLKGLF 360
            SYKEWILK IE TWNLF KKFI LWDEHKDGPGEAYLP IYN PEVRQLVQ  F++ LF
Sbjct: 292 -SYKEWILKIIENTWNLFDKKFIALWDEHKDGPGEAYLPEIYNKPEVRQLVQRKFMRDLF 350

Query: 361 HDTLGFGAAKMIRRIVGVAHVEDFESNXRCXQTSXMXEAGTXVCKTSSXRKGGRFQSINE 420
           HDTLGFGAAKMIRRIVGVAHVEDFES     + +          K    +    F SI+ 
Sbjct: 351 HDTLGFGAAKMIRRIVGVAHVEDFESIKDASKRAECERKALDFAKMLL-KNRRDFDSIDG 409

Query: 421 VVSAIRPLD 429
           VVSA++PLD
Sbjct: 410 VVSAMQPLD 418