Jatropha Genome Database

JcCB0273441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0273441.10 + phase: 0 
         (212 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29801.m003084 conserved hypothetical protein                          312   8e-86
29801.m003083 conserved hypothetical protein                          293   6e-80

>29801.m003084 conserved hypothetical protein
          Length = 210

 Score =  312 bits (799), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 150/207 (72%), Positives = 172/207 (83%), Gaps = 2/207 (0%)

Query: 5   SAVIQYHVIINSPRTSTGSVRYAQEIGIELSKQTLTNATDFIWTLLQLNKETERKGVQDI 64
           S+++QY VI N   TSTG VR+A EIG+ELS +TLT AT FIW LL LN    RK    I
Sbjct: 4   SSLVQYQVI-NKAETSTGGVRFAGEIGVELSNKTLTEATGFIWKLLDLNILRNRKCAARI 62

Query: 65  SLIIEDMEGVAYTDDNEIHFSTKYVANYS-EDLKSEVIGILYHEMTHIWQWNGNGKTPGG 123
           SLIIED++GVAYT+DNE+H ST+Y+ N S E L+SEV GILYHE THIWQWNGNG+TPGG
Sbjct: 63  SLIIEDIDGVAYTEDNEMHISTRYIENCSRECLRSEVTGILYHETTHIWQWNGNGQTPGG 122

Query: 124 LIEGIADLVRLKANYAPSHWVQPGQGERWDQGYDVTARFLDYCNDLRDGFVADLNKKMRS 183
           LIEGIAD VRLKANYAPSHWVQPGQG+RWDQGYDVTARFLDYCNDLR+GFVA+LNKKM  
Sbjct: 123 LIEGIADFVRLKANYAPSHWVQPGQGDRWDQGYDVTARFLDYCNDLRNGFVAELNKKMID 182

Query: 184 DYKVEYFVELLGKPVHQLWNEYKAKHT 210
           DY  E+F+ELLGK V QLW++YKAK+ 
Sbjct: 183 DYSDEFFIELLGKSVDQLWSDYKAKYA 209


>29801.m003083 conserved hypothetical protein
          Length = 225

 Score =  293 bits (749), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 130/200 (65%), Positives = 159/200 (79%)

Query: 11  HVIINSPRTSTGSVRYAQEIGIELSKQTLTNATDFIWTLLQLNKETERKGVQDISLIIED 70
           + + N+  ++ G  R++ EIG + S QTL+ ATDFIW L Q     +RK VQ +SL I+D
Sbjct: 25  YTVTNTAGSTAGGARFSAEIGEDYSLQTLSAATDFIWRLFQQPNAEDRKNVQKVSLFIDD 84

Query: 71  MEGVAYTDDNEIHFSTKYVANYSEDLKSEVIGILYHEMTHIWQWNGNGKTPGGLIEGIAD 130
           M+GVAY  +NEIH S +Y+  YS DLK E  G++YHEMTHIWQWNGNG+ PGGLIEGIAD
Sbjct: 85  MDGVAYASNNEIHVSARYIGGYSGDLKREYTGVIYHEMTHIWQWNGNGQAPGGLIEGIAD 144

Query: 131 LVRLKANYAPSHWVQPGQGERWDQGYDVTARFLDYCNDLRDGFVADLNKKMRSDYKVEYF 190
            VRLKANYAPSHWVQPGQG+RWDQGYDVTARFLDYCNDLR+GFVA+LNKKM+  Y  ++F
Sbjct: 145 FVRLKANYAPSHWVQPGQGDRWDQGYDVTARFLDYCNDLRNGFVAELNKKMKDGYSDQFF 204

Query: 191 VELLGKPVHQLWNEYKAKHT 210
           V+LLGK V QLW++YKAK+ 
Sbjct: 205 VDLLGKSVDQLWSDYKAKYA 224