Jatropha Genome Database
- JcCB0271581.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0271581.10 + phase: 0
(329 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29804.m001498 DNA binding protein, putative 412 e-116
28179.m000478 DNA binding protein, putative 242 1e-64
28179.m000479 DNA binding protein, putative 151 4e-37
29827.m002528 Transcription factor AtMYC2, putative 84 1e-16
29742.m001404 DNA binding protein, putative 79 3e-15
29883.m002023 DNA binding protein, putative 77 1e-14
29647.m002101 conserved hypothetical protein 77 2e-14
27964.m000352 DNA binding protein, putative 71 6e-13
29904.m002956 DNA binding protein, putative 70 1e-12
30198.m000869 DNA binding protein, putative 69 2e-12
27964.m000356 transcription factor, putative 68 5e-12
30147.m014419 Transcription factor ICE1, putative 67 1e-11
30068.m002581 DNA binding protein, putative 67 1e-11
29737.m001209 conserved hypothetical protein 60 1e-09
29869.m001184 transcription factor, putative 60 1e-09
29869.m001185 hypothetical protein 60 1e-09
29869.m001189 hypothetical protein 60 1e-09
30076.m004456 DNA binding protein, putative 59 2e-09
28179.m000457 DNA binding protein, putative 59 3e-09
29842.m003700 DNA binding protein, putative 58 6e-09
30170.m013700 conserved hypothetical protein 57 1e-08
29596.m000688 DNA binding protein, putative 57 1e-08
30190.m011223 transcription factor, putative 57 2e-08
29739.m003684 DNA-directed RNA polymerase beta chain, putative 56 2e-08
30174.m008814 DNA binding protein, putative 55 3e-08
29646.m001078 conserved hypothetical protein 55 4e-08
30138.m004021 DNA binding protein, putative 55 4e-08
29631.m001025 hypothetical protein 55 5e-08
30128.m008988 conserved hypothetical protein 55 5e-08
30131.m006993 conserved hypothetical protein 55 6e-08
30076.m004542 hypothetical protein 54 8e-08
30204.m001816 Phytochrome-interacting factor, putative 54 1e-07
30170.m013852 conserved hypothetical protein 53 2e-07
30174.m009029 transcription factor, putative 52 3e-07
30115.m001235 conserved hypothetical protein 52 4e-07
29912.m005337 DNA binding protein, putative 50 1e-06
30136.m001043 hypothetical protein 50 1e-06
28567.m000052 Transcription factor ICE1, putative 49 2e-06
30169.m006534 DNA binding protein, putative 49 4e-06
29598.m000464 conserved hypothetical protein 49 4e-06
29736.m002076 DNA binding protein, putative 48 7e-06
30147.m014038 DNA binding protein, putative 47 1e-05
>29804.m001498 DNA binding protein, putative
Length = 309
Score = 412 bits (1060), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/315 (71%), Positives = 246/315 (78%), Gaps = 15/315 (4%)
Query: 24 VAAFGENYMQHSLIN---NLKIPMDTSSSTTTIVRPTXXXXXXXXXXXXXXXXSFSPNNI 80
+AAFGEN MQHSL + NLK M+TS + +RPT SFSPN I
Sbjct: 1 MAAFGEN-MQHSLSHQNFNLKASMETSPLSGINLRPTKQQLKPNENYLHS---SFSPN-I 55
Query: 81 LSFANS---NQLMGSIVKPKEEAVLCSKSINNTTPPSDMLIPQG-SIMNQNYMFKACQGA 136
LSFANS N MG +VKPKEEA + KSI+ T P MLI QG S+ N NY+F ACQGA
Sbjct: 56 LSFANSANTNHPMGLVVKPKEEAAVYYKSIH-TLPSEHMLISQGNSLENHNYVFNACQGA 114
Query: 137 KRI--NTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLK 194
KRI N NNGR+SQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLK
Sbjct: 115 KRISTNNNNGRISQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLK 174
Query: 195 QLQERVKTLEEQTKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIEARIC 254
QLQERVKTLEEQTK+KTMESVVIVKKS+L+F KGPFDE LPEIEARIC
Sbjct: 175 QLQERVKTLEEQTKKKTMESVVIVKKSRLVFGEEDTSSSDESFSKGPFDEPLPEIEARIC 234
Query: 255 DKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTIIAQMDSEYEMSV 314
DKHVLIRIHCE RKGVLEKTIAE+EKLHL++ NSSVLTFGSSALDVTIIAQMD+E+ MSV
Sbjct: 235 DKHVLIRIHCEKRKGVLEKTIAEIEKLHLSVTNSSVLTFGSSALDVTIIAQMDNEFSMSV 294
Query: 315 KDLVKNLHSAFKFFM 329
KDLVK+LHSAFK FM
Sbjct: 295 KDLVKDLHSAFKLFM 309
>28179.m000478 DNA binding protein, putative
Length = 331
Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/270 (53%), Positives = 173/270 (64%), Gaps = 36/270 (13%)
Query: 74 SFSPNNILSFANSNQLMGSIVKPKEEAVLCSKSINN-------TTPPSDMLIPQGSIMNQ 126
SF + S NS + +KPK+EA S N + PP D+ Q
Sbjct: 84 SFETPKVSSPVNSQRFY---MKPKDEAA----SPRNMHFQPVISRPPYDI---------Q 127
Query: 127 NYMFKACQGAKRINTNNGR-------LSQSQDHIIAERKRREKLSQRFIALSAIVPGLKK 179
N+ K QG TNN R S +QDHI+AERKRREKLSQRFIALSA+VPGLKK
Sbjct: 128 NHDIKTIQGI----TNNKRPYSVTRTASHAQDHILAERKRREKLSQRFIALSALVPGLKK 183
Query: 180 MDKASVLGDAIKYLKQLQERVKTLEEQTKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXK 239
MDKASVLGDAIK++KQLQERVK LE+QTK++TMES++++KKSQL
Sbjct: 184 MDKASVLGDAIKHVKQLQERVKMLEDQTKKRTMESIILIKKSQL--SADDESSSCDDNSD 241
Query: 240 GPFDETLPEIEARICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALD 299
G D LPEIEAR+ DK VL RIHCE ++GV+ K + EVE LHL+IIN++VL FGSS LD
Sbjct: 242 GCSDSALPEIEARVSDKDVLFRIHCEKQQGVVPKILHEVENLHLSIINNTVLPFGSSTLD 301
Query: 300 VTIIAQMDSEYEMSVKDLVKNLHSAFKFFM 329
+TIIAQMD M+VKDLVKNL A FM
Sbjct: 302 ITIIAQMDENNSMAVKDLVKNLRVALLKFM 331
>28179.m000479 DNA binding protein, putative
Length = 299
Score = 151 bits (381), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 102/165 (61%), Gaps = 6/165 (3%)
Query: 89 LMGSIVKPKEEAVLCSKSINNTTPPSDMLIPQGSIMNQNYMFKACQGAKRINTNNGRLSQ 148
L + VKPK E K N P S L GS +Q QG K+ +
Sbjct: 120 LDSTTVKPKTEIGPNGKV--NHDPSS--LFGLGSFEDQYGSTYYNQGTKKAGASTRSPLH 175
Query: 149 SQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTK 208
+QDH+IAERKRREKLSQRFIALSA+VPGLKKMDKASVLGDAIKYLK LQERVKTLEEQ
Sbjct: 176 AQDHVIAERKRREKLSQRFIALSAVVPGLKKMDKASVLGDAIKYLKHLQERVKTLEEQAA 235
Query: 209 RKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIEARI 253
+KTMESVV VKKSQ+ G D LPEIEAR+
Sbjct: 236 KKTMESVVFVKKSQVY--ADDDSSSIDENFVGSCDHPLPEIEARV 278
>29827.m002528 Transcription factor AtMYC2, putative
Length = 663
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 22/160 (13%)
Query: 143 NGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKT 202
NGR + +H+ AER+RREKL+QRF AL A+VP + KMDKAS+LGDAI Y+K+L+ +++T
Sbjct: 478 NGR-EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELRTKLQT 536
Query: 203 LEEQTKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLP------------EIE 250
E + ++ +E V K + L P D+ L +I+
Sbjct: 537 AE--SDKEELEKEVESMKKEFL-------SKDSRPGSPPPDKELKMSNNHGSKAIDMDID 587
Query: 251 ARICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSV 290
+I +IRI C + + +A ++ L L++ ++SV
Sbjct: 588 VKIIGWDAMIRIQCSKKNHPAARLMAALKDLDLDVHHASV 627
>29742.m001404 DNA binding protein, putative
Length = 615
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 143 NGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKT 202
NGR + +H+ AER+RREKL+QRF AL A+VP + KMDKAS+LGDAI Y+ +LQ ++K+
Sbjct: 439 NGR-EEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKS 497
Query: 203 LEEQTKR 209
+E + ++
Sbjct: 498 MEAEREK 504
>29883.m002023 DNA binding protein, putative
Length = 503
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 143 NGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKT 202
NGR + +H+ AER+RREKL+QRF AL A+VP + KMDKAS+LGDAI Y+ LQ +++
Sbjct: 350 NGR-EEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQTKIRV 408
Query: 203 LEEQ 206
LE +
Sbjct: 409 LETE 412
>29647.m002101 conserved hypothetical protein
Length = 668
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 52/61 (85%)
Query: 149 SQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTK 208
S +H++AER+RREKL++RFI L ++VP + KMDKAS+LGD I+Y+KQL+++++ LE + +
Sbjct: 478 SANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLEARNR 537
Query: 209 R 209
+
Sbjct: 538 Q 538
>27964.m000352 DNA binding protein, putative
Length = 486
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%)
Query: 151 DHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRK 210
+H+ AER RREKL+ RF AL A+VP + +MDKAS+L DA+ Y+ +L+ +++ LE Q RK
Sbjct: 308 NHVEAERLRREKLNHRFYALRAVVPNVSRMDKASLLSDAVCYINELKAKIEELESQLHRK 367
Query: 211 TMESV 215
+ + V
Sbjct: 368 SSKRV 372
>29904.m002956 DNA binding protein, putative
Length = 411
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 19/171 (11%)
Query: 147 SQSQDHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQERVKTLE 204
SQ HI ER RR+++++ L +++PG +++ D+AS++G AI+++++L++ ++ LE
Sbjct: 205 SQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLE 264
Query: 205 EQTKRK----------TMESVVIVKKSQL-LFCXXXXXXXXXXXXKGPFDET------LP 247
Q +R+ ES V V++ Q F G +ET L
Sbjct: 265 SQKRRRLYGDAASRQMAGESSVAVQQPQSPFFPLPNDQMKLVQFETGLREETAENKSCLA 324
Query: 248 EIEARICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSAL 298
++E ++ +I+I R G L KTIA +E L LNI+++++ T + L
Sbjct: 325 DVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLQLNILHTNITTIEQTVL 375
>30198.m000869 DNA binding protein, putative
Length = 213
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 147 SQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQ 206
S + +I++ER RR+KL++R AL A+VP + KMDKAS++ DAI Y++ L E+ + + Q
Sbjct: 31 SAASKNIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIDYIQDLHEQERRI--Q 88
Query: 207 TKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIEARIC------------ 254
+ +ES + K + L + K D+ +R C
Sbjct: 89 AEIMELESGKLKKNNNLGYDFEQELPVLLRSKKKKIDQFYDSTGSRACPIELLELSVAYM 148
Query: 255 -DKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTII 303
+K +L+ + C R + K E L L II +++ T L I
Sbjct: 149 GEKTLLVSLTCSKRTDTMVKLCEVFESLKLKIITANITTVSGRLLKTVFI 198
>27964.m000356 transcription factor, putative
Length = 288
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQ 206
H+ AER+RREKL+ RF AL A+VP + +MDKAS+L DA+ Y+ L+ ++ LE Q
Sbjct: 110 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYINDLKAKIDELESQ 164
>30147.m014419 Transcription factor ICE1, putative
Length = 549
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKT 211
+++AER+RR+KL+ R L ++VP + KMD+AS+LGDAI+YLK+L +R+ L + +
Sbjct: 363 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTP 422
Query: 212 MESVVIVKKSQLLFCXXXXXXXXXXXXK-----GPFDETLP-EIEARICD-KHVLIRIHC 264
S + S K P P +E R+ + + V I + C
Sbjct: 423 PGSSMTPTTSFHPLTPTPSALPSRIKDKLCPSPLPSPNGQPARVEVRLREGRAVNIHMFC 482
Query: 265 EIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDV 300
R G+L + ++ L L+I + + F A+D+
Sbjct: 483 GRRPGLLLSIMRALDNLGLDIQQAVISCFNGFAMDI 518
>30068.m002581 DNA binding protein, putative
Length = 479
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 45/58 (77%)
Query: 151 DHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTK 208
+H+ AER+RRE+L+ RF AL ++VP + KMDKAS+L DA+ Y+++L+ +V L+ Q +
Sbjct: 305 NHVEAERQRRERLNNRFYALRSVVPNVSKMDKASLLADAVTYIQELKAKVDELKTQVQ 362
>29737.m001209 conserved hypothetical protein
Length = 474
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 119 PQGSIMNQNYMFKACQGA-----KRINTNNGRLSQSQDHIIAERKRREKLSQRFIALSAI 173
P G++MNQ + GA +R+ G+ + H IAER RRE++++R AL +
Sbjct: 231 PGGAMMNQPQASGSTGGAPAQPRQRVRARRGQATDP--HSIAERLRRERIAERMKALQEL 288
Query: 174 VPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
VP K DKAS+L + I Y+K LQ +VK L
Sbjct: 289 VPNANKTDKASMLDEIIDYVKFLQLQVKVL 318
>29869.m001184 transcription factor, putative
Length = 576
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 25/182 (13%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKT 211
+I AER+RR++L+ R L A+VP + ++KAS+LGDAI+++K+LQ++ K L+++ + +
Sbjct: 337 NIDAERRRRKRLNGRLYDLRALVPKISNLNKASILGDAIEFVKELQKQAKELQDELEEHS 396
Query: 212 MESVV------------------------IVKKSQLLFCXXXXXXXXXXXXKGPFDETLP 247
+ V +V S+++ C KG E
Sbjct: 397 DDDQVAKNGIHNNIPQEMLNQNGGIVNGFLVGSSEVVCCSKLNHKPETSHDKGQQMEVQV 456
Query: 248 EIEARICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTIIAQMD 307
E+ A+I +++ CE + G K + ++ L L + N++V +F V + + D
Sbjct: 457 EV-AQIDGNKFFVKVFCEHKTGGFMKLMEALDCLGLEVTNANVTSFRGLVSIVFKVEKKD 515
Query: 308 SE 309
SE
Sbjct: 516 SE 517
>29869.m001185 hypothetical protein
Length = 593
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 25/179 (13%)
Query: 155 AERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKTMES 214
AER+RR++L+ R L A+VP + ++KAS+LGDAI+++K+LQ++ K LE + + + +
Sbjct: 350 AERRRRKRLNGRLYDLRALVPKISNLNKASILGDAIEFVKELQKQAKELENELEEHSDDD 409
Query: 215 VVI------------------------VKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIE 250
+ V S+++ C KG E E+
Sbjct: 410 QGVKNGIHNNIPQEILNQDGGIVNGFHVGSSEVVSCSKLNHKSETSHDKGQQMEVQVEV- 468
Query: 251 ARICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTIIAQMDSE 309
A+I +++ CE + G K + ++ L L + N++V +F +V + + DSE
Sbjct: 469 AQIDGNEFFVKVFCEHKAGGFMKLMEALDCLGLEVTNANVTSFRGLVSNVFKVEKKDSE 527
>29869.m001189 hypothetical protein
Length = 361
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 30/158 (18%)
Query: 144 GRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
GR ++D + AER+RR+ L+ R L A+VP + ++K S+LGDAI+++K+LQ++ K L
Sbjct: 185 GRGPPAKD-LKAERRRRKMLNDRLYDLRALVPKISNLNKVSILGDAIEFVKELQKQAKEL 243
Query: 204 EEQTKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIE--------ARICD 255
E + + + + + K +P+ A+I
Sbjct: 244 ENELEEHSDDDQGV---------------------KNGIHNNIPQETLNQDGVDVAQIDG 282
Query: 256 KHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTF 293
+++ CE + G K + ++ L L + N++V +F
Sbjct: 283 NEFFVKVFCEHKAGRFMKLMEALDCLGLEVTNANVTSF 320
>30076.m004456 DNA binding protein, putative
Length = 400
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 147 SQSQDHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQERVKTLE 204
SQ HI ER RR +++ +L +++P +++ D+AS++G AI ++K+L++ +++LE
Sbjct: 211 SQRMTHIAVERNRRRQMNDHLNSLRSLMPPSYVQRGDQASIIGGAIDFVKELEQLLQSLE 270
Query: 205 EQTKRK---TMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIEARICDKHVLIR 261
Q + + E+ + + + L K + EIE HV ++
Sbjct: 271 AQRRTRKPEEAEAGIGISSNGLFTLQSDCNGNCEEESKVKRISEVGEIEVTAVHNHVNLK 330
Query: 262 IHCEIRKGVLEKTIAEVEK-----LHLNIINSSVLTFGSSALDVTIIAQMDSEYEMSV 314
I C + G+L + I +E+ LHLNI +S S L + ++ S E++
Sbjct: 331 IQCHRKPGLLLRAIFALEELRLSVLHLNITSSETTVLYSFNLKIEEDCKLGSADEVAA 388
>28179.m000457 DNA binding protein, putative
Length = 354
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 125 NQNYMFKACQGAKRINTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKAS 184
N +F A++ N + Q +++AER+RR++L+ R L +IVP + KMD+ S
Sbjct: 159 NNGQVFSMGLSAEKKNKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTS 218
Query: 185 VLGDAIKYLKQLQERVKTL-EEQTKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFD 243
+LGD I Y+K+L ER+ L EE+++ T E ++ +++ F+
Sbjct: 219 ILGDTIDYMKELLERINKLQEEESEDGTTEMTLMTNLNEI------KPNEVLVRNSPKFN 272
Query: 244 ETLPEIEARICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNI 285
EI+ R I I C + G+L T+ +E L L I
Sbjct: 273 VDRREIDTR-------IDICCSAKPGLLLSTVNTLEALGLEI 307
>29842.m003700 DNA binding protein, putative
Length = 207
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 155 AERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQ 206
AER+RR+KLS+R +AL A VP + M+KA+++ DAI Y+++LQ+ VK L +Q
Sbjct: 43 AERRRRKKLSERLLALRASVPIITNMNKATIIEDAITYIQELQKHVKHLSDQ 94
>30170.m013700 conserved hypothetical protein
Length = 247
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Query: 141 TNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGL-KKMDKASVLGDAIKYLKQLQER 199
T++G S+ + HI+ ER+RR+K+ F L A++P L K DK++++ +AIKY++ L+E
Sbjct: 26 TSSGE-SEHEAHILTERERRKKMRTMFTNLHALLPQLPAKADKSTIVDEAIKYVRTLEET 84
Query: 200 VKTLEEQTKRK 210
++TLE+Q + K
Sbjct: 85 LQTLEKQRQEK 95
>29596.m000688 DNA binding protein, putative
Length = 349
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 38/174 (21%)
Query: 147 SQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQ 206
Q +++AER+RR++L+ R L +IVP + KMD+ S+LGD I Y+K+L ER+ +L+++
Sbjct: 180 GQPSKNLMAERRRRKRLNDRLAMLRSIVPKISKMDRTSILGDTIDYVKELLERINSLQQE 239
Query: 207 TK---------RKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIEARICDKH 257
+ + T S IV+ S P+ ++
Sbjct: 240 LEMGSNQLNILKDTKASEFIVRNS-------------------------PKFHVERRNED 274
Query: 258 VLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTIIAQMDSEYE 311
I I C + G+L T+ +E L L I + F D +I A E E
Sbjct: 275 TQIEICCASKPGLLLSTVTALEALGLEIQQCVISCFN----DFSIQASCSEELE 324
>30190.m011223 transcription factor, putative
Length = 492
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 23/156 (14%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEE------ 205
H +RKR+ ++S+R + L +IVP + K D+ S+L D I+YL++L +RV+ LE
Sbjct: 295 HETLDRKRKGQISERLMILKSIVPSMSKTDEVSILDDTIEYLQKLGKRVEELESCREFTE 354
Query: 206 ---QTKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKG-PFDETLPEIE----------- 250
+T+RK +++ + K DE EIE
Sbjct: 355 CEARTRRKPQDAIERTSDNYGSSIIGSKQKSLINKRKAYDIDEAEAEIENIMSKEGSAEN 414
Query: 251 --ARICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLN 284
I DK V+I I C R+G+L + I L L+
Sbjct: 415 ISVNINDKDVVIEIKCPWREGLLLEIIDAASHLKLD 450
>29739.m003684 DNA-directed RNA polymerase beta chain, putative
Length = 592
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 42/213 (19%)
Query: 1 MEDPSFIEQ-WPMNSIDDLSLLPLVAAFGENYMQH-SLINNLKIPMDTSSSTTTIVRPTX 58
+++PS + Q WP S +D+S L AA G++ Q L NL +D
Sbjct: 233 VQNPSSMTQLWPSTSFEDVS--SLSAAMGQDTTQQFDLQGNLGDDLD------------- 277
Query: 59 XXXXXXXXXXXXXXXSFSPNNILSFANSNQLMGSIVKPKEEAVLCSKSINNTTPPSDMLI 118
S +NIL ++L S+V K++ L ++ T S+M +
Sbjct: 278 ----------FLGRRYISMDNILQL---DKLSASVVS-KDKENLQGYPLSRFTVGSNMTM 323
Query: 119 PQGSIMNQNYMFK--------ACQGAKRINTNNGRLSQSQDHIIAERKRREKLSQRFIAL 170
+ +Y+ + +C G + R + H IAER RREK+++R L
Sbjct: 324 TTNGV---SYLSQTASTAPAASCNGTGKPRVRARRGQATDPHSIAERLRREKIAERMKNL 380
Query: 171 SAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
+VP K+DKAS+L + I+Y+K LQ +VK L
Sbjct: 381 QELVPNSSKVDKASMLDEIIEYVKFLQLQVKVL 413
>30174.m008814 DNA binding protein, putative
Length = 465
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
H +ERKRR+K++QR L +VP K DKAS+L + I+YLKQLQ +V+ +
Sbjct: 288 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 339
>29646.m001078 conserved hypothetical protein
Length = 265
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 150 QDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQ 197
++H AERKRR +++ L ++VPG KKMDKAS+L + IKY+K+L+
Sbjct: 72 RNHCEAERKRRARINAHLDTLRSLVPGAKKMDKASLLAEVIKYMKELK 119
>30138.m004021 DNA binding protein, putative
Length = 440
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
H +ER+RR++++Q+ AL +VP K DKAS+L + I+YLKQLQ +V+ +
Sbjct: 252 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQAM 303
>29631.m001025 hypothetical protein
Length = 472
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 19/188 (10%)
Query: 125 NQNYMFKACQGAKRINTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKAS 184
N+ + KA Q ++R N +++ ER RR ++ L A+VP + KMD AS
Sbjct: 283 NKKKISKAIQKSERDNF-------PSKNLVTERNRRNRIKDGLYTLRALVPKITKMDIAS 335
Query: 185 VLGDAIKYLKQLQERVKTLEEQTKRKTM------ESVVIVKKSQLL-----FCXXXXXXX 233
+LGDAI+Y+ +LQ+ K LE++ + + + +K QL
Sbjct: 336 ILGDAIEYIGELQKEKKKLEDELEGIEEEECEKSNAQLPLKLEQLHEGRKPLPPVEIDNN 395
Query: 234 XXXXXKGPFDETLPEIEA-RICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLT 292
G ++ +IE +I + LI++ CE ++G + + + L L ++++++ T
Sbjct: 396 EDSSGFGEKEKIEVQIEVNQIGKREFLIKLFCEKKRGGFGRLMDAIYSLGLQVVDANMTT 455
Query: 293 FGSSALDV 300
F L++
Sbjct: 456 FNGKVLNI 463
>30128.m008988 conserved hypothetical protein
Length = 758
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 46/66 (69%)
Query: 138 RINTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQ 197
R T + R ++ H ++ER+RR++++++ AL ++P K+DKAS+L +AI+YLK LQ
Sbjct: 456 RGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQ 515
Query: 198 ERVKTL 203
+V+ +
Sbjct: 516 LQVQIM 521
>30131.m006993 conserved hypothetical protein
Length = 428
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKT 211
+++AER+RR++L+ R L ++VP + KMD+AS+LGDAI YLK+L +R+ L + + T
Sbjct: 242 NLMAERRRRKRLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE-ST 300
Query: 212 MESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLP-------EIEARICD-KHVLIRIH 263
++ + S + +LP +E R+ + + V I +
Sbjct: 301 PPGSLLPQSSSFHPLTPTPPTLPCRVKEELCPSSLPGPKSQPARVEVRVREGRAVNIHMF 360
Query: 264 CEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDV 300
R G+L T+ ++ L L+I + + F ALDV
Sbjct: 361 SAGRPGLLLSTMRALDNLGLDIQQAVISCFNGFALDV 397
>30076.m004542 hypothetical protein
Length = 584
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 150 QDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQ 197
Q H ++ERKRR+K++++ AL A++P K+DKAS+L AI+YLK LQ
Sbjct: 383 QVHSLSERKRRDKINKKMRALQALIPNSDKVDKASMLDKAIEYLKTLQ 430
>30204.m001816 Phytochrome-interacting factor, putative
Length = 572
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 46/66 (69%)
Query: 138 RINTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQ 197
R +T+ R ++ H ++ER+RR++++++ AL ++P K DKAS+L +AI+YLK LQ
Sbjct: 351 RGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 410
Query: 198 ERVKTL 203
+V+ +
Sbjct: 411 LQVQMM 416
>30170.m013852 conserved hypothetical protein
Length = 312
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
H ++E++RR +++++ AL ++P K DKAS+L +AI+YLKQLQ +V+ L
Sbjct: 130 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 181
>30174.m009029 transcription factor, putative
Length = 656
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 48/161 (29%)
Query: 158 KRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEE---------QTK 208
K+RE +RF+AL +++P + ++DKA++L D I+YLK+L+ RV+ LE + K
Sbjct: 463 KQREH--ERFLALKSMIPTVTEIDKAAILDDMIRYLKELEARVEDLESCVESVDYIARPK 520
Query: 209 RKTME-----------------------SVVIVKKSQLLFCXXXXXXXXXXXXKGPFDET 245
R M+ V + + L FC ++
Sbjct: 521 RNYMDMAEQTSDNYDKIGKDNKHWMNKMKVSDIYYTDLEFCEVS-------------EDG 567
Query: 246 LP-EIEARICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNI 285
LP +++ + +K V+I + C R+ +L + E+ LHL++
Sbjct: 568 LPSDVKVSMREKEVVIEMKCAYREYILLDIMDEISNLHLDV 608
>30115.m001235 conserved hypothetical protein
Length = 406
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
H ++E++RR +++++ AL ++P K DKAS+L +AI+YLKQLQ +V+ L
Sbjct: 166 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 217
>29912.m005337 DNA binding protein, putative
Length = 502
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 136 AKRINTNNGRLSQSQ-DHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLK 194
A+R + R + +Q H+I+ERKRREK+++ F AL ++P K DKASVL +YL
Sbjct: 301 ARREHMTANRPTTTQLHHMISERKRREKINESFEALRKLLPPEAKKDKASVLTRTREYLT 360
Query: 195 QLQERVKTLEEQTKR 209
L+ +V L ++ ++
Sbjct: 361 LLKTQVAELSQRNQQ 375
>30136.m001043 hypothetical protein
Length = 207
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 38/51 (74%)
Query: 154 IAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLE 204
+A R RRE++S++ L +VPG KMD AS+L +AI+Y+K L+++++ L+
Sbjct: 111 VAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKKQIRLLQ 161
>28567.m000052 Transcription factor ICE1, putative
Length = 469
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 10/72 (13%)
Query: 156 ERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLE----------E 205
ER+RR+ L+ ++ AL +VP K D+ SV+GDAI Y+K+L V L+ E
Sbjct: 273 ERQRRQHLNDKYKALQNLVPNPTKADRTSVVGDAIDYIKELLRTVNELKLLVEKKRCARE 332
Query: 206 QTKRKTMESVVI 217
++KR+ E I
Sbjct: 333 RSKRQKTEEDSI 344
>30169.m006534 DNA binding protein, putative
Length = 336
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 148 QSQDHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQERVKTLEE 205
Q HI ER RR+++++ L +++P +K+ D+AS++G + Y+ +LQ+ ++ LE
Sbjct: 103 QRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQASIIGGVVNYINELQQVLQALEA 162
Query: 206 QTKRKTMESVV 216
+ +RK V+
Sbjct: 163 KKQRKVYSEVL 173
>29598.m000464 conserved hypothetical protein
Length = 326
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 145 RLSQSQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
R Q+ D H IAER RRE++++R AL +VP K D+A+++ + + Y+K L+ +VK L
Sbjct: 166 RRGQATDPHSIAERLRRERIAERMKALQELVPTANKTDRAAMIDEIVDYVKFLRLQVKVL 225
>29736.m002076 DNA binding protein, putative
Length = 265
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 145 RLSQSQD-HIIAERKRREKLSQRFIALSAIVPGLKK-MDKASVLGDAIKYLKQLQERVKT 202
R Q+ D H +AER RREK+S+R L +VPG K + KA VL + I Y++ LQ +V+
Sbjct: 141 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 200
Query: 203 L 203
L
Sbjct: 201 L 201
>30147.m014038 DNA binding protein, putative
Length = 275
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 145 RLSQSQD-HIIAERKRREKLSQRFIALSAIVPGLKK-MDKASVLGDAIKYLKQLQERVKT 202
R Q+ D H +AER RREK+S+R L +VPG K + KA VL + I Y++ LQ +V+
Sbjct: 149 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 208
Query: 203 L 203
L
Sbjct: 209 L 209