Jatropha Genome Database

JcCB0269831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0269831.10 - phase: 0 
         (178 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29848.m004650 transcription factor hy5, putative                      181   2e-46
29889.m003420 Transcription factor HY5, putative                       77   6e-15

>29848.m004650 transcription factor hy5, putative
          Length = 169

 Score =  181 bits (458), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 97/151 (64%), Positives = 100/151 (66%)

Query: 1   MQEQATXXXXXXXXXXXXXXXXXXAFQLEVKEGMESDEEIRRVPEISGEPAGTSASGRDA 60
           MQEQA+                  A QLEVKEGMESDEEIRRVPE  GE AGTSASGRDA
Sbjct: 1   MQEQASSSIAANSLPSSSERSSSSALQLEVKEGMESDEEIRRVPEFGGEQAGTSASGRDA 60

Query: 61  SSVAGLDRVQAPGEGQSQRKRGRSPADKEXXXXXXXXXXXVSAQQARERKKAYLNELETR 120
           SSVAG DRVQAPGEGQ+ RKRGRSPADKE           VSAQQARERKKAYLNELETR
Sbjct: 61  SSVAGRDRVQAPGEGQTPRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLNELETR 120

Query: 121 VXXXXXXXXXXXXXXSTLQNENQMLRHVCHN 151
           V              STLQNENQMLRH+  N
Sbjct: 121 VKDLEKKNSELEERLSTLQNENQMLRHILKN 151


>29889.m003420 Transcription factor HY5, putative
          Length = 172

 Score = 76.6 bits (187), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 5/117 (4%)

Query: 35  ESDEEIRRVPEISGEPAGTSASGRDASSVAGLDRVQAPGEGQSQRKRGRSPADKEXXXXX 94
           ESDE++  VP++   P  +S      +++      ++P     +R+RGR+P DKE     
Sbjct: 42  ESDEDLFTVPDVETRPPASSVVNPTTATIN-----KSPQVLPEKRRRGRNPVDKEYRRLK 96

Query: 95  XXXXXXVSAQQARERKKAYLNELETRVXXXXXXXXXXXXXXSTLQNENQMLRHVCHN 151
                 VSAQQARERKK Y+N+LE+R               STL NEN MLR V  N
Sbjct: 97  RLLRNRVSAQQARERKKVYVNDLESRAKELQDNNSKLEEKISTLINENAMLRKVLMN 153