Jatropha Genome Database

JcCB0269501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0269501.10 + phase: 0 /partial
         (213 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008939 conserved hypothetical protein                          362   e-101
29666.m001450 conserved hypothetical protein                          216   5e-57
56072.m000045 conserved hypothetical protein                          206   9e-54
29631.m001048 conserved hypothetical protein                          178   1e-45

>30174.m008939 conserved hypothetical protein
          Length = 411

 Score =  362 bits (928), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/213 (82%), Positives = 185/213 (86%)

Query: 1   KHAEAVRIKCLGVPTVDMKNVCSQLEDKTFGKIIHRHCGSLVLYRGRNYNPKKRPVIPLM 60
           KHAEAVRIKCLGVPTVDMKNVC+QLEDKTFGKIIHRHCG LVLYRGRNY+PKKRPVIPLM
Sbjct: 198 KHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHCGLLVLYRGRNYHPKKRPVIPLM 257

Query: 61  MWRPHEPIYPRLIKTTIDGLSIDETKEMRKRGLAVPALTKLAKNGYYASLVPMVRDAFLT 120
           MWRPHEPIYP+LIKTTI+GLSI+ETKEMRK+GLA+PALTKLAKNGYYASLVPMVRDAFL 
Sbjct: 258 MWRPHEPIYPKLIKTTIEGLSIEETKEMRKKGLALPALTKLAKNGYYASLVPMVRDAFLV 317

Query: 121 NELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYKPPEDGELFADRE 180
           NELVRIDCQGL KSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYKPPE G+ F DRE
Sbjct: 318 NELVRIDCQGLPKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYKPPEYGQSFVDRE 377

Query: 181 FFDDPEGSSMGLXXXXXXXXXXXXPGFYSGDDE 213
            FDDPE +                  FYS  DE
Sbjct: 378 CFDDPESNEEYSKESCSSDESNDHQDFYSSSDE 410


>29666.m001450 conserved hypothetical protein
          Length = 409

 Score =  216 bits (551), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 109/179 (60%), Positives = 136/179 (75%), Gaps = 1/179 (0%)

Query: 1   KHAEAVRIKCLGVPTVDMKNVCSQLEDKTFGKIIHRHCGSLVLYRGRNYNPKKRPVIPLM 60
           K AEAVRIKCLGVPT+DM NVC  LEDK+ GKII+RH   L+LYRGRNY+PK RPVIP+M
Sbjct: 226 KKAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPVIPIM 285

Query: 61  MWRPHEPIYPRLIKTTIDGLSIDETKEMRKRGLAVPALTKLAKNGYYASLVPMVRDAFLT 120
           +W+P+ PI+P+L+K   DGLS +ETKE+R RGL  PAL KL +NG Y  +V  VR+AF T
Sbjct: 286 LWKPYAPIFPKLVKNVADGLSFEETKEIRNRGLNSPALMKLTRNGVYVYVVERVREAFQT 345

Query: 121 NELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGK-DYKPPEDGELFAD 178
            E+VR+DC  +  SD KKIG KLRDLVPC+ + F+ EQI++WRGK D +   +  L AD
Sbjct: 346 EEVVRLDCTHVGSSDCKKIGVKLRDLVPCVPILFKDEQIILWRGKRDQEQNPEAALMAD 404


>56072.m000045 conserved hypothetical protein
          Length = 748

 Score =  206 bits (523), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 93/168 (55%), Positives = 127/168 (75%)

Query: 1   KHAEAVRIKCLGVPTVDMKNVCSQLEDKTFGKIIHRHCGSLVLYRGRNYNPKKRPVIPLM 60
           K     +IKC+GV TVDM NVC QLE++T GK+I+R  G + L+RGRNYN + RP  PLM
Sbjct: 291 KRRRVCKIKCMGVCTVDMDNVCQQLEERTGGKVIYRKGGVVYLFRGRNYNYRTRPRFPLM 350

Query: 61  MWRPHEPIYPRLIKTTIDGLSIDETKEMRKRGLAVPALTKLAKNGYYASLVPMVRDAFLT 120
           +W+P  P+YPRLIK   +GL+++E  EMR++G  +  + KLAKNG Y +LV  VR+AF  
Sbjct: 351 LWKPVTPVYPRLIKRAPEGLTLEEASEMRRKGRKLIPICKLAKNGVYCNLVKEVREAFEE 410

Query: 121 NELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYK 168
            ELVRIDCQG+  SDY+K+G KL++LVPC+L++FE E I++WRG+D+K
Sbjct: 411 CELVRIDCQGVNGSDYRKVGAKLKELVPCLLISFEHEHILMWRGRDWK 458


>29631.m001048 conserved hypothetical protein
          Length = 561

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 123/169 (72%)

Query: 1   KHAEAVRIKCLGVPTVDMKNVCSQLEDKTFGKIIHRHCGSLVLYRGRNYNPKKRPVIPLM 60
           + +   +++C G+PTVDM N+C  LE++T GKII+R  G + L+ GRNY+ + R   P+M
Sbjct: 231 RRSPVCKVRCKGIPTVDMNNICRHLEERTGGKIIYRIGGVVYLFCGRNYDYRSRVRYPVM 290

Query: 61  MWRPHEPIYPRLIKTTIDGLSIDETKEMRKRGLAVPALTKLAKNGYYASLVPMVRDAFLT 120
           +W+P  P+YP+LI+   +GL+  E  E R++G  +  + KLAKNG Y +LV  VR+AF  
Sbjct: 291 LWKPAAPVYPKLIQDAPEGLTKAEADEFREKGKNLLPICKLAKNGVYITLVRDVRNAFEG 350

Query: 121 NELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYKP 169
           + LV+IDC+G+  SDYKK+G KL++LVPC+L++F+ E I++WRG+++KP
Sbjct: 351 SPLVKIDCKGMNPSDYKKLGAKLKELVPCVLLSFDDEHILMWRGQNWKP 399