Jatropha Genome Database

JcCB0268641.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0268641.10 - phase: 2 /partial
         (188 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29588.m000853 conserved hypothetical protein                          257   3e-69
29869.m001192 conserved hypothetical protein                           75   2e-14
27471.m000413 ATP binding protein, putative                            72   2e-13

>29588.m000853 conserved hypothetical protein
          Length = 552

 Score =  257 bits (656), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 127/186 (68%), Positives = 151/186 (81%), Gaps = 2/186 (1%)

Query: 4   QPATSTKTCSDQCVIPWSCGKQ-NQNQEIHIPSSEDSFPSNSGAAIICSEMTLVEGYEVK 62
           QPA STKTC DQ  IPW+C KQ ++N+ ++IP SED+FP+NSG A +CSE TLV+GYEVK
Sbjct: 329 QPA-STKTCLDQSAIPWNCEKQESKNRNLYIPFSEDTFPANSGGANVCSETTLVQGYEVK 387

Query: 63  ASVAPVLRAIFAKYGDIAANCQYKSPSDRASLLEIVSDVVHRLQSSDIPLTLSEIRVLQN 122
            S+A +L +IFAKYGDIAANC YKSP+ RASLLE V ++V RLQS+D+PLTLSEI+VL+N
Sbjct: 388 TSLAAILTSIFAKYGDIAANCHYKSPTMRASLLETVCNIVQRLQSTDMPLTLSEIKVLKN 447

Query: 123 EMKDLESTRLKLSWLTQPLEKISEVEKIAEMRSMLKSVKANSMMVIKAATKXXXXXXXXX 182
           E+KDLE  +LKLSWLTQPLEKISE EKIAEM SMLKSVKANSMM++KAATK         
Sbjct: 448 EIKDLEGEQLKLSWLTQPLEKISEFEKIAEMHSMLKSVKANSMMIVKAATKELEEELTEL 507

Query: 183 XXXQKR 188
              QKR
Sbjct: 508 VALQKR 513


>29869.m001192 conserved hypothetical protein
          Length = 400

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 1/128 (0%)

Query: 47  AIICSEMTLVEGYEVKASVAPVLRAIFAKYGDIAANCQYKSPSDRASLLEIVSDVVHRLQ 106
           ++I      V  Y V+A+ A +L++I  KYGDIAANC+ +S S R   LE +  VV  LQ
Sbjct: 209 SVISDSCVSVGKYHVRANSASILQSIIDKYGDIAANCRLESTSLRTYYLECLCSVVQELQ 268

Query: 107 SSDI-PLTLSEIRVLQNEMKDLESTRLKLSWLTQPLEKISEVEKIAEMRSMLKSVKANSM 165
           S+ +  LT S++R L   +KD+ES ++ +SWL   L  ++E  ++   +   +  K N  
Sbjct: 269 STSLNQLTKSKVRELLAVLKDVESAQIDVSWLRSILNGLTEAVELNNKQQAAEEAKTNCD 328

Query: 166 MVIKAATK 173
            VI++  K
Sbjct: 329 HVIESTRK 336


>27471.m000413 ATP binding protein, putative
          Length = 630

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 1/87 (1%)

Query: 59  YEVKASVAPVLRAIFAKYGDIAANCQYKSPSDRASLLEIVSDVVHRLQSSDI-PLTLSEI 117
           Y VKA    +L A+  K+GDIAANC   S   R+S L+IV  ++ +LQ+++   LT  E+
Sbjct: 483 YTVKAEFEHILEAVLLKHGDIAANCSLHSLQCRSSFLDIVCGIIQKLQATETNDLTQFEL 542

Query: 118 RVLQNEMKDLESTRLKLSWLTQPLEKI 144
             + + + DLES RL++ WL Q LE+I
Sbjct: 543 ESMSSSVHDLESVRLEVGWLRQRLEEI 569