Jatropha Genome Database

JcCB0267821.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0267821.20 + phase: 0 
         (243 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30040.m000262 conserved hypothetical protein                          252   1e-67
29719.m000330 conserved hypothetical protein                          217   5e-57
29775.m000103 conserved hypothetical protein                          180   4e-46
30170.m013926 conserved hypothetical protein                          171   3e-43
29738.m001024 conserved hypothetical protein                          170   4e-43
30174.m008741 conserved hypothetical protein                          157   4e-39
30170.m014247 conserved hypothetical protein                          150   5e-37
29973.m000394 conserved hypothetical protein                          112   1e-25
29810.m000141 conserved hypothetical protein                           74   9e-14

>30040.m000262 conserved hypothetical protein
          Length = 212

 Score =  252 bits (643), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 136/216 (62%), Positives = 149/216 (68%), Gaps = 45/216 (20%)

Query: 34  TISLQQPTGKD-SSKSAKLLXXXXXXXXXXPIITPTCK----MLGNGLHDKYIHGGTRMT 88
            ISLQQPT K   SKSAKL           PIITPTCK    + G+ LHD +IHG     
Sbjct: 36  AISLQQPTHKKGPSKSAKLFRRFRAVFRSFPIITPTCKIPVSLHGSRLHDGHIHG----- 90

Query: 89  GTLFGHRKTRINLAIQENPXXXXXXXXXXXXXXGKLLQDMGMGLVRIALECEKRRNEKTK 148
                                             KLLQDMGMGLVR+ALECEK+ +EKTK
Sbjct: 91  ----------------------------------KLLQDMGMGLVRVALECEKKPHEKTK 116

Query: 149 IIEEPIWTMYCNGRKSGYGVKREPTDEDLVVMQILHVISMGAGVIPEDG-DHLDGELTYM 207
           II+EPIWTMYCNGRK+GYGVKR PTDEDLVVMQILHVISMGAGVIP+DG +  DGELTYM
Sbjct: 117 IIDEPIWTMYCNGRKTGYGVKRAPTDEDLVVMQILHVISMGAGVIPDDGTEQPDGELTYM 176

Query: 208 RAHFERVVGSKDSETYYMMNPDGNNGPELTIFFVRI 243
           RAHFERV+GSKDSETYYMMNPDGN+GPEL+IFFVRI
Sbjct: 177 RAHFERVIGSKDSETYYMMNPDGNSGPELSIFFVRI 212


>29719.m000330 conserved hypothetical protein
          Length = 255

 Score =  217 bits (552), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 108/219 (49%), Positives = 148/219 (67%), Gaps = 10/219 (4%)

Query: 34  TISLQQPTGKDSSKSAKLLXXXXXXXXXXPIITPTCKM--LGNGL----HDKYIHGGTRM 87
           T +L QP+ +      K+           PIITP CK+  L  GL    H +++  G ++
Sbjct: 38  TSNLLQPSSEKKKNKTKVFRVFRSVFRSLPIITPACKIPVLQGGLLPDPHHRHV-SGNKV 96

Query: 88  TGTLFGHRKTRINLAIQENPXXXXXXXXXXXXXXGKLLQDMGMGLVRIALECEKR-RNEK 146
           TGTLFG+RK R++L+IQENP                L +++G G+VRIALECEKR   +K
Sbjct: 97  TGTLFGYRKGRVSLSIQENPRCFPSVIVELAIQTNVLQKELGSGMVRIALECEKRPEKDK 156

Query: 147 TKIIEEPIWTMYCNGRKSGYGVKREPTDEDLVVMQILHVISMGAGVIP--EDGDHLDGEL 204
            ++++EP+WTM+CNG+K+GYGVKR+  +EDL VM++L  +SMGAGV+P   D +  D E 
Sbjct: 157 IRLLDEPLWTMFCNGKKNGYGVKRDALEEDLKVMELLRAVSMGAGVLPGSSDAEGPDSEF 216

Query: 205 TYMRAHFERVVGSKDSETYYMMNPDGNNGPELTIFFVRI 243
            Y+RAHFERVVGSKDSET YM++P+GNNGPEL+IFFVR+
Sbjct: 217 AYIRAHFERVVGSKDSETLYMISPEGNNGPELSIFFVRV 255


>29775.m000103 conserved hypothetical protein
          Length = 276

 Score =  180 bits (457), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 100/221 (45%), Positives = 129/221 (58%), Gaps = 12/221 (5%)

Query: 34  TISLQQPTGKDSSKSAKLLXXXXXXXXXXPIITPTCKMLGNGLHDKYIHG-GTRMTGTLF 92
            +SLQ+   K  S+ + LL           II PTCK L    H       G ++TGTLF
Sbjct: 57  AVSLQR-LNKLHSRFSSLLRSIFKIVAFPNIIIPTCKWLSIPTHLSIKSSLGRKVTGTLF 115

Query: 93  GHRKTRINLAIQENPXXXXXXXXXXXXXXGKLLQDMGMGLVRIALECEKRR-----NEKT 147
           GHR+  ++ A+Q++P                L+++M  GLVRIALEC+K +         
Sbjct: 116 GHRRGHVSFAVQDDPRSEPVLLLELAMSTSTLVKEMSSGLVRIALECDKVQVPTNGTRSG 175

Query: 148 KIIEEPIWTMYCNGRKSGYGVKREPTDEDLVVMQILHVISMGAGVIP--EDGDH---LDG 202
           K+  EP WTMYCNGRK GY V R  T+ D  V+  +  +S+GAGVIP  EDG      +G
Sbjct: 176 KLFNEPTWTMYCNGRKCGYAVSRTCTELDWHVLNTVQSVSVGAGVIPMVEDGRKNAGSEG 235

Query: 203 ELTYMRAHFERVVGSKDSETYYMMNPDGNNGPELTIFFVRI 243
           EL YMRA FERVVGS+DSE +YMMNP+GN GPEL+IF +RI
Sbjct: 236 ELLYMRAKFERVVGSRDSEAFYMMNPEGNGGPELSIFLLRI 276


>30170.m013926 conserved hypothetical protein
          Length = 229

 Score =  171 bits (433), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 90/184 (48%), Positives = 124/184 (67%), Gaps = 5/184 (2%)

Query: 63  PIITPTCKMLGN-GLHDKYIHGGTRMTGTLFGHRKTRINLAIQENPXXXXXXXXXXXXXX 121
           P++T  CKM+   G   K +   +  TGTLFG+RK R++LAIQE+P              
Sbjct: 45  PMLTSGCKMVALLGRPRKPMLKDSATTGTLFGYRKGRVSLAIQEDPHCVPMFVIELPIHT 104

Query: 122 GKLLQDMGMGLVRIALECEKRRNEKTKIIEEPIWTMYCNGRKSGYGVKREP-TDEDLVVM 180
               ++M   +VRIALE E + ++K K++EE +W +YCNGRK GY ++R+  +D++L VM
Sbjct: 105 SAFHKEMASDIVRIALESETKTHKK-KVMEEFVWAVYCNGRKIGYSIRRKQMSDDELHVM 163

Query: 181 QILHVISMGAGVIPE--DGDHLDGELTYMRAHFERVVGSKDSETYYMMNPDGNNGPELTI 238
           Q+L  +SMGAGV+P   + +  DGELTY+RA F+RVVGSKDSE  YM+NPDG  GPEL+I
Sbjct: 164 QLLRGVSMGAGVLPSPNEKETADGELTYIRARFDRVVGSKDSEALYMINPDGAAGPELSI 223

Query: 239 FFVR 242
           FFVR
Sbjct: 224 FFVR 227


>29738.m001024 conserved hypothetical protein
          Length = 255

 Score =  170 bits (431), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 82/172 (47%), Positives = 115/172 (66%), Gaps = 3/172 (1%)

Query: 75  GLHDKYIHGG--TRMTGTLFGHRKTRINLAIQENPXXXXXXXXXXXXXXGKLLQDMGMGL 132
           G+     H G  T++ GT+FG+R+  ++LA Q +                 L+++M  GL
Sbjct: 84  GMSRSAYHSGLATKLVGTIFGYRRGHVHLAFQVDVKLNPPFLIELATPTSVLVREMASGL 143

Query: 133 VRIALECEKRRNEKT-KIIEEPIWTMYCNGRKSGYGVKREPTDEDLVVMQILHVISMGAG 191
           VRIALECEK+  +K  K+++EPIW  YCNG+K GY ++RE   E+  V++ +  ISMGAG
Sbjct: 144 VRIALECEKKPQKKAGKLLDEPIWRTYCNGKKCGYAMRRECGPEEWKVLKAVEPISMGAG 203

Query: 192 VIPEDGDHLDGELTYMRAHFERVVGSKDSETYYMMNPDGNNGPELTIFFVRI 243
           V+P +G   DGEL YMRA FERVVGSKDSE +YMMNPDG+ GPEL+++ +R+
Sbjct: 204 VLPGNGAGSDGELMYMRARFERVVGSKDSEAFYMMNPDGSGGPELSVYLLRV 255


>30174.m008741 conserved hypothetical protein
          Length = 256

 Score =  157 bits (397), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 76/171 (44%), Positives = 110/171 (64%), Gaps = 11/171 (6%)

Query: 82  HG-GTRMTGTLFGHRKTRINLAIQENPXXXXXXXXXXXXXXGKLLQDMGMGLVRIALECE 140
           HG G R+ GTLFG+R+  ++ A Q +P                L+++M  GLVRIALEC+
Sbjct: 88  HGLGPRVVGTLFGYRRGHVHFAFQRDPNSPPAFLIELATPISGLVREMASGLVRIALECD 147

Query: 141 KRRNEKTK----IIEEPIWTMYCNGRKSGYGVKREPTDEDLVVMQILHVISMGAGVIP-- 194
           K + ++ K    ++EEP+W  YCNG+K G+  +RE   ++  V++ +  ISMGAGV+P  
Sbjct: 148 KEKEDQEKKAVRLLEEPMWRTYCNGKKCGFATRRECGPKEWKVLKAVEPISMGAGVLPGI 207

Query: 195 --EDGDHLDGELTYMRAHFERVVGSKDSETYYMMNPDGNNGPELTIFFVRI 243
             E G   DGE+ YMRA FER+VGS+DSE +YMMNPD N  PEL+++ +R+
Sbjct: 208 ATEPG--TDGEIMYMRAKFERIVGSRDSEAFYMMNPDSNGAPELSVYLLRV 256


>30170.m014247 conserved hypothetical protein
          Length = 224

 Score =  150 bits (379), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 106/163 (65%), Gaps = 3/163 (1%)

Query: 82  HGGTRMTGTLFGHRKTRINLAIQENPXXXXXXXXXXXXXXGKLLQDMGMGLVRIALEC-- 139
           H  T +TGT FG+RK R++  +Q++                 L ++M  GL+RIALEC  
Sbjct: 62  HAST-LTGTFFGYRKGRVSFCLQDDTRTSPLLLLEFAVPTAYLAREMQYGLLRIALECDR 120

Query: 140 EKRRNEKTKIIEEPIWTMYCNGRKSGYGVKREPTDEDLVVMQILHVISMGAGVIPEDGDH 199
           +K R+    +   P+W+MYCNGRK G+ ++R+ T  D+ V++++  +S+GAGV+P     
Sbjct: 121 QKERSSSCSLFNVPVWSMYCNGRKVGFAIRRQMTVSDVGVLKMMQSVSVGAGVLPVPPKS 180

Query: 200 LDGELTYMRAHFERVVGSKDSETYYMMNPDGNNGPELTIFFVR 242
            DG+L Y+RA FERV+GS DSE+++M+NP G++G EL+IF +R
Sbjct: 181 QDGDLMYLRASFERVIGSADSESFHMINPIGSSGQELSIFMLR 223


>29973.m000394 conserved hypothetical protein
          Length = 250

 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 100/162 (61%), Gaps = 4/162 (2%)

Query: 85  TRMTGTLFGHRK-TRINLAIQ-ENPXXXXXXXXXXXXXXGKLLQDMGMGLVRIALECEKR 142
           T + GT+FG+R+  ++   IQ +                 +L+++M  GLVRIALEC + 
Sbjct: 82  TMVVGTIFGNRRGNKVWFCIQFDRFSTKSLFLLELNIPTPQLVKEMQCGLVRIALECARP 141

Query: 143 RNEKTKIIEEPIWTMYCNGRKSGYGVKREPTDEDLVVMQILHVISMGAGVIPEDGDHLDG 202
                 +   P+WTMYCNG+++G+ +KR+ TD++ ++++ +  +++GAGVIP     L  
Sbjct: 142 EFNSCPLRSIPVWTMYCNGKRTGFSLKRKATDQNRLMLKTMQSMTVGAGVIPAGFGSLGN 201

Query: 203 --ELTYMRAHFERVVGSKDSETYYMMNPDGNNGPELTIFFVR 242
             E+ YMRA++E VVG+ ++E+++++N D   G EL++F +R
Sbjct: 202 TEEIMYMRANYEHVVGNANTESFHLINLDECVGQELSVFLMR 243


>29810.m000141 conserved hypothetical protein
          Length = 221

 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 4/102 (3%)

Query: 92  FGHRKTRINLAIQ-ENPXXXXXXXXXXXXXXGKLLQDMGMGLVRIALECEK---RRNEKT 147
           FG R+ +++L IQ ++                 L ++M  G++RIALEC       N  T
Sbjct: 86  FGFRRGKVSLCIQTDSKSTNPILLLEFALPTAVLAREMQGGILRIALECSAGSGSDNSST 145

Query: 148 KIIEEPIWTMYCNGRKSGYGVKREPTDEDLVVMQILHVISMG 189
            +   P+WTMYCNGRK+GY VKR P+  D+  +++++ + +G
Sbjct: 146 SLFSMPVWTMYCNGRKAGYAVKRRPSKVDMEALKLMNSVVVG 187