Jatropha Genome Database

JcCB0267531.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0267531.10 + phase: 2 /pseudo/partial
         (270 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014529 Cycloeucalenol cycloisomerase, putative                 402   e-113

>30147.m014529 Cycloeucalenol cycloisomerase, putative
          Length = 295

 Score =  402 bits (1034), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/233 (86%), Positives = 210/233 (90%), Gaps = 3/233 (1%)

Query: 13  SDTAGTKSGCCSSSLWLAPNPSKRWGELFFLCYTPFWLTLCLGVVVPYKLYESFTELEYL 72
            DT   +SG  +SSLWLAPN SKRWGELFFLCYTPFWLTLCLG+VVPYKLYESFTELEYL
Sbjct: 3   DDTTSKESGSYTSSLWLAPNESKRWGELFFLCYTPFWLTLCLGIVVPYKLYESFTELEYL 62

Query: 73  LLAMISAVPSFLIPMIFVGKADSSLSWKDRYWVKASVFSASLWIIIFSYVGNYFWTHYFF 132
           LLAM+SA PSFLIPMIFVGK +  LS      V   ++ ASLWIIIFSYVGNYFWTHYFF
Sbjct: 63  LLAMVSAAPSFLIPMIFVGKVNYRLSTSI---VNLLLWQASLWIIIFSYVGNYFWTHYFF 119

Query: 133 TVLGASYTFPSWKMNDVPHTTFLLTHVCFLFYHVTSNMTLRRLRHAIAHLPDKLRWATEA 192
           TVLGASYTFPSWKMNDVPHTTFLLTHVCFLFYHVTSNMTLRRLRHAIA LPDKLRWATEA
Sbjct: 120 TVLGASYTFPSWKMNDVPHTTFLLTHVCFLFYHVTSNMTLRRLRHAIADLPDKLRWATEA 179

Query: 193 AWILALAYFIAYLETLAISNFPYYEFVDRASMYTVGSLFYAIYFIVSFPMFLR 245
           AWILALAYFIAYLETLAISNFPYYEFVDR+SMY VGSLFYAIYFIVSFPMFLR
Sbjct: 180 AWILALAYFIAYLETLAISNFPYYEFVDRSSMYKVGSLFYAIYFIVSFPMFLR 232