Jatropha Genome Database
- JcCB0254461.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0254461.10 + phase: 0 /pseudo/partial
(163 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006286 Casbene synthase, chloroplast precursor, putative 134 2e-32
30169.m006283 Casbene synthase, chloroplast precursor 133 4e-32
30169.m006276 Casbene synthase, chloroplast precursor, putative 129 5e-31
29827.m002614 Casbene synthase, chloroplast precursor, putative 97 5e-21
30169.m006314 Casbene synthase, chloroplast precursor, putative 95 2e-20
29840.m000603 (+)-delta-cadinene synthase isozyme A, putative 64 4e-11
29771.m000073 (R)-limonene synthase, putative 61 2e-10
30156.m001703 (R)-limonene synthase, putative 59 8e-10
30156.m001716 D-cadinene synthase, putative 59 1e-09
29910.m000951 (+)-delta-cadinene synthase isozyme A, putative 59 1e-09
28166.m001038 (+)-delta-cadinene synthase isozyme A, putative 57 4e-09
29910.m000944 Terpinolene synthase, chloroplast precursor, putative 53 7e-08
30131.m007001 (R)-limonene synthase, putative 50 5e-07
29842.m003696 1,8-cineole synthase, chloroplast precursor, putative 48 2e-06
30206.m000792 (R)-limonene synthase, putative 48 2e-06
30156.m001700 (R)-limonene synthase, putative 48 2e-06
>30169.m006286 Casbene synthase, chloroplast precursor, putative
Length = 599
Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 93/137 (67%), Gaps = 11/137 (8%)
Query: 38 SSAKPTVRRTLKACSSXQSKTKVRPLANFPFTVWGERLGSLHF-----------INRYEK 86
SSAKP + +AC S + +VRPLA+FP TVWG R SL F +N ++
Sbjct: 39 SSAKPHAKPPAQACLSSTTHQEVRPLAHFPPTVWGNRFASLTFNPSEFESYDGRVNVLKE 98
Query: 87 VKNDMLMASTSDSVEKIISIYTLHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDYDLYT 146
D+L++S +DSVE ++ I L RLGVSYHFE++IEE L+KIFN+ P+ ++E + DLYT
Sbjct: 99 KVKDLLVSSATDSVETVVLIDLLCRLGVSYHFENDIEELLSKIFNSQPDLVDEKECDLYT 158
Query: 147 VAVIFRVFRHHGFKISS 163
A++FRVFR HGFK+SS
Sbjct: 159 AAIVFRVFRQHGFKMSS 175
>30169.m006283 Casbene synthase, chloroplast precursor
Length = 601
Score = 133 bits (334), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 94/138 (68%), Gaps = 13/138 (9%)
Query: 38 SSAKPTVRRTLKACSSXQSKTKVRPLANFPFTVWGERLGSLHF------------INRYE 85
SSAK ++ +AC S + +VRPLA FP TVWG R SL F I +
Sbjct: 41 SSAKSHFKKPTQACLSSTTHQEVRPLAYFPPTVWGNRFASLTFNPSEFESYDERVIVLKK 100
Query: 86 KVKNDMLMASTSDSVEKIISIYTLHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDYDLY 145
KVK D+L++STSDSVE +I I L RLGVSYHFE++IEE L+KIFN+ P+ ++E + DLY
Sbjct: 101 KVK-DILISSTSDSVETVILIDLLCRLGVSYHFENDIEELLSKIFNSQPDLVDEKECDLY 159
Query: 146 TVAVIFRVFRHHGFKISS 163
T A++FRVFR HGFK+SS
Sbjct: 160 TAAIVFRVFRQHGFKMSS 177
>30169.m006276 Casbene synthase, chloroplast precursor, putative
Length = 614
Score = 129 bits (325), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 88/136 (64%), Gaps = 11/136 (8%)
Query: 39 SAKPTVRRTLKACSSXQSKTKVRPLANFPFTVWGERLGSLHF-----------INRYEKV 87
SAK ++ +AC S +S+ + RPLANFP TVWG S F N +K
Sbjct: 40 SAKSVTNKSPQACLSTKSQQEFRPLANFPPTVWGSHFASPTFSESEFGTYDRQANVLQKK 99
Query: 88 KNDMLMASTSDSVEKIISIYTLHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDYDLYTV 147
++L +S SDSVEKI I L RLGVSYHFE++IEE L++IF+ P L+E YDLYTV
Sbjct: 100 IRELLTSSRSDSVEKIAFIDLLCRLGVSYHFENDIEEQLSQIFSCQPGLLDEKQYDLYTV 159
Query: 148 AVIFRVFRHHGFKISS 163
A++FRVFR HGFK+SS
Sbjct: 160 ALVFRVFRQHGFKMSS 175
>29827.m002614 Casbene synthase, chloroplast precursor, putative
Length = 551
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 12/114 (10%)
Query: 60 VRPLANFPFTVWGERLGSLH--------FINRYEKVKN---DMLMASTSDSVEKIISIYT 108
R LA FP T+WG S + + E++K DMLM ST + + I I
Sbjct: 14 ARRLAKFPSTIWGCSFASFSLKDSEIESYTQQVEELKGKVKDMLMQSTKEITQNIEVINL 73
Query: 109 LHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDY-DLYTVAVIFRVFRHHGFKI 161
L RLGVSYHFE EIE+ LN IF + P+FLN+N + DLYTVA++FRV R HG K+
Sbjct: 74 LCRLGVSYHFESEIEQQLNLIFASLPSFLNDNGHLDLYTVALLFRVLRQHGRKV 127
>30169.m006314 Casbene synthase, chloroplast precursor, putative
Length = 555
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 71/119 (59%), Gaps = 15/119 (12%)
Query: 57 KTKVRPLANFPFTVWG------------ERLGSLHFINRYEKVKNDMLMASTSDSVEKII 104
K K RPLANFP T WG L + EKV+ M+ AST D +E +
Sbjct: 4 KDKYRPLANFPSTAWGCSFASFSSSNSDFELYTREVETLKEKVRP-MVTASTKDPLENVQ 62
Query: 105 SIYTLHRLGVSYHFEDEIEENLNKIFNNXPNFL--NENDYDLYTVAVIFRVFRHHGFKI 161
I L+RLGVSYHFE+EI + LN IF PN + ++NDYDLYTVA++F++ R +G K+
Sbjct: 63 IINLLYRLGVSYHFENEITDQLNHIFEIIPNHIISDDNDYDLYTVAILFQILRQYGHKV 121
>29840.m000603 (+)-delta-cadinene synthase isozyme A, putative
Length = 550
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 13/114 (11%)
Query: 61 RPLANFPFTVWGERLGSL---------HFINRYEKVKNDML-MASTSDSVEKIIS-IYTL 109
R LA+F +WG+R S + E++K ++ M +++D +I++ I L
Sbjct: 17 RHLASFHPNIWGDRFLSCAAESTDIEDDMEQQVERLKEEVKKMIASADEPSQILNLIDLL 76
Query: 110 HRLGVSYHFEDEIEENLNKIFNNXPNFLNENDYDLYTVAVIFRVFRHHGFKISS 163
RLGVSYHFE EIEE L ++ N N ++ D DL++VA+ FR+ R G +S
Sbjct: 77 QRLGVSYHFEKEIEEALQQVLNM--NSDSDKDDDLHSVALRFRLLREQGLNVSC 128
>29771.m000073 (R)-limonene synthase, putative
Length = 551
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Query: 62 PLANFPF--TVWGERLGSLHFINRYEKVKND--MLMASTSDSVEKIISIYTLHRLGVSYH 117
P+ +F F ++ E +G L+ I R +K+K D M++ T ++ I TL RLG++YH
Sbjct: 21 PIWDFDFVQSLKSEFVGELN-IKRIDKLKEDVKMMLNKTMAPSDQFELIDTLQRLGLAYH 79
Query: 118 FEDEIEENLNKIFNNXPNFLNENDYDLYTVAVIFRVFRHHGFKISS 163
F DEI+ + I+N+ N DL+T+A+ FR+ R HG+ IS
Sbjct: 80 FGDEIKRIVKSIYNSHRNDNTWMKEDLHTIALQFRLLRQHGYNISQ 125
>30156.m001703 (R)-limonene synthase, putative
Length = 584
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 19/125 (15%)
Query: 50 ACSSXQSKTKVRPLANFPFTVWG----ERLGSLHFIN-----RYEKVKND---MLMASTS 97
A S S+ K R AN+ T+W E L + + + R +K+K++ +L T
Sbjct: 43 ASRSNASQAKHRRSANYHPTIWDPKAIECLRTPYTYDGVHGARLQKLKDEVRSLLTTFTK 102
Query: 98 DSVEKIISIYTLHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDYDLYTVAVIFRVFRHH 157
+ ++ I ++ RLGVSYHF +EIEE LN + + +D DLYT A+ FR+ R H
Sbjct: 103 EPCGQLKLIDSMQRLGVSYHFREEIEEILNLVELD-------SDSDLYTTALHFRLLRQH 155
Query: 158 GFKIS 162
GF IS
Sbjct: 156 GFTIS 160
>30156.m001716 D-cadinene synthase, putative
Length = 275
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 21/126 (16%)
Query: 50 ACSSXQSKTKVRPLANFPFTVWGERL----------GSLHFINRYEKVKND---MLMAST 96
A S S+ K R AN+ T+W + +H R +K+K++ +L T
Sbjct: 43 ASRSNASQAKHRRSANYHPTIWDPKAIECLRTPYTYDGVHGA-RLQKLKDEVRSLLTTFT 101
Query: 97 SDSVEKIISIYTLHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDYDLYTVAVIFRVFRH 156
+ ++ I ++ RLGVSYHF +EI+E LN + + +D DLYT A+ FR+ R
Sbjct: 102 KEPCGQLKLIDSMQRLGVSYHFREEIKEILNLVELD-------SDSDLYTTALHFRLLRQ 154
Query: 157 HGFKIS 162
HGF IS
Sbjct: 155 HGFTIS 160
>29910.m000951 (+)-delta-cadinene synthase isozyme A, putative
Length = 547
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 26/124 (20%)
Query: 56 SKTKVRPLANFPFTVWGERLGSLHFINR----------------YEKVKNDMLMASTSDS 99
+ +VR A F +VWG+ +FI E+ M+++ T
Sbjct: 10 QRAQVRRTAQFHPSVWGD-----YFIKNAPDNKMVSIWKEQAKVLEEEVRRMIISETQKP 64
Query: 100 VEKIISIYTLHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDYDLYTVAVIFRVFRHHGF 159
K+ I + RLG++YHFE+EI E + ++++N ++D DLY +A+ FR+ R G+
Sbjct: 65 SGKLKLIDVIQRLGIAYHFEEEIGEVIEQVYSN-----YDDDEDLYDIALRFRLLRQQGY 119
Query: 160 KISS 163
+SS
Sbjct: 120 NVSS 123
>28166.m001038 (+)-delta-cadinene synthase isozyme A, putative
Length = 558
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 18/108 (16%)
Query: 69 TVWGERL-----------GSL--HFINRYEKVKNDMLMASTSDSVEKIISIYTLHRLGVS 115
T+WG+ GS+ F +KV+ M++ ++ +K+ I + RLGV
Sbjct: 31 TIWGDHFLANLSHSKIIDGSIEQQFEGLKQKVRK-MIIDLNNEPCKKLGLIDAVQRLGVG 89
Query: 116 YHFEDEIEENLNKIFNNXPNFLNENDYDLYTVAVIFRVFRHHGFKISS 163
YHF+ EIE+ L K++++ ++++ DL TVA+ FR+ R HG K+S
Sbjct: 90 YHFKSEIEDVLQKVYHD----YSDDEDDLNTVALRFRLLRQHGIKVSC 133
>29910.m000944 Terpinolene synthase, chloroplast precursor, putative
Length = 476
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 60 VRPLANFPFTVWGERLGSL-----HFINRY-------EKVKNDMLMASTSDSVEKIISIY 107
R LANFP T WG SL F + EKVK DMLM S + E I +
Sbjct: 16 ARFLANFPPTEWGYSFASLLPQDSEFESHTKELDLVKEKVK-DMLMQSRKELTENIEFVN 74
Query: 108 TLHRLGVSYHFEDEIEENLNKIFN 131
L RLGVSYHFE EI E LN +FN
Sbjct: 75 CLCRLGVSYHFESEIIEQLN-VFN 97
>30131.m007001 (R)-limonene synthase, putative
Length = 599
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 91 MLMASTSDSVEKIISIYTLHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDYDLYTVAVI 150
ML ++++ ++++ I L RLG++YHFEDEIE L I+ + + L + DLY+ A+
Sbjct: 100 MLTQTSNNILDQLEMIDALQRLGIAYHFEDEIETILKIIYVSNNSQLRK---DLYSTALE 156
Query: 151 FRVFRHHGF 159
FR+ R G+
Sbjct: 157 FRLLRQQGY 165
>29842.m003696 1,8-cineole synthase, chloroplast precursor, putative
Length = 572
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 91 MLMASTSDSVEKIISIYTLHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDYDLYTVAVI 150
+L S E + I + RLG+ +HF+DEI+E L + + P++ N+N DL+ +A+
Sbjct: 77 ILRKEGEGSHEVLAMIDAIQRLGIDHHFQDEIDEILQRQYTI-PSYYNDN--DLHGLALR 133
Query: 151 FRVFRHHGFKISS 163
FR+ R G+ +S+
Sbjct: 134 FRLLRQGGYNVSA 146
>30206.m000792 (R)-limonene synthase, putative
Length = 222
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 100 VEKIISIYTLHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDYDLYTVAVIFRVFRHHGF 159
++++ I TL RLG++YHF+DEI + LN I+ DL+ A+ FR+ R HG+
Sbjct: 28 LDQLELIDTLQRLGLAYHFQDEINKILNNIYIQNRFEKTWTKEDLHATALQFRLLRQHGY 87
Query: 160 KISS 163
IS
Sbjct: 88 NISQ 91
>30156.m001700 (R)-limonene synthase, putative
Length = 596
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 15/114 (13%)
Query: 61 RPLANFPFTVWG-----ERLGSLHFINRY----EKVKNDM---LMASTSDSVEKIISIYT 108
R AN+P + W + L + ++Y E +K ++ LM + K+ +
Sbjct: 58 RRSANYPSSAWDYDHLLQSLAANDSEDKYRRQVEGLKEEVRESLMNGEMKPLAKLELVDA 117
Query: 109 LHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDYDLYTVAVIFRVFRHHGFKIS 162
+ RLG+ YHFE EI+ L+ + +N + + ND +LY+VA+ +R+FR HG+ +S
Sbjct: 118 VQRLGLKYHFEMEIKNALHILHSNASS--DGND-ELYSVALRYRLFRQHGYDVS 168