Jatropha Genome Database

JcCB0252341.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0252341.30 + phase: 0 /pseudo
         (204 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27613.m000622 phosphoribosylamine-glycine ligase, putative            181   2e-46

>27613.m000622 phosphoribosylamine-glycine ligase, putative
          Length = 301

 Score =  181 bits (459), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/184 (56%), Positives = 123/184 (66%), Gaps = 6/184 (3%)

Query: 1   MESKALLSGLCSNSTFPAIQNNKKPLSLTFXXXXXXXXXGQSQNYVSFNTHQSISPPRVK 60
           ME+KALLS L +NS  P+ Q N     L++             NY+ F T QS SP  +K
Sbjct: 1   MEAKALLSSLSTNSALPSFQKNSL---LSYDCFSYHSSTVNFHNYLWFKTLQSTSPQGIK 57

Query: 61  SLSFKRLECANSSEKLGSTGFHNEGYLNSGIKRKKLAVFVSGGGSNFKSVHEACIQGSVH 120
               K L+C NS E+L +  F N+ Y    IK+KKLAVFVSGGGSNFKS+H+AC+QG V 
Sbjct: 58  ---LKPLQCVNSKERLETIVFENKEYKKPDIKKKKLAVFVSGGGSNFKSIHQACLQGLVF 114

Query: 121 GDVVAVVTNRKGCGGAEYARNKEIPVVLFPRTKDEPDGLSPRDLVAALRFGXFLFVFLNF 180
           GDVVAVVTN++ CGGAEYAR+KEIPVVLFPRTKDEP GLSP DLVAALR     F+ L  
Sbjct: 115 GDVVAVVTNKQDCGGAEYARDKEIPVVLFPRTKDEPHGLSPSDLVAALRELEVDFILLAG 174

Query: 181 ELKF 184
            LK 
Sbjct: 175 YLKL 178