Jatropha Genome Database

JcCB0246261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0246261.10 - phase: 0 /pseudo/partial
         (69 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29776.m000488 isoamylase, putative                                    126   2e-30
29908.m006089 isoamylase, putative                                     80   2e-16

>29776.m000488 isoamylase, putative
          Length = 795

 Score =  126 bits (317), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/58 (91%), Positives = 55/58 (94%)

Query: 1   LIAEAWDAGGLYQVGCFPHWQIWSEWNGKYRDIVRQFIKGTDGFSGAFAECLCGSPEL 58
           L+AEAWD GGLYQVG FPHWQIWSEWNGKYRD+VRQFIKGTDGFSGAFAECLCGSP L
Sbjct: 476 LVAEAWDTGGLYQVGSFPHWQIWSEWNGKYRDVVRQFIKGTDGFSGAFAECLCGSPNL 533


>29908.m006089 isoamylase, putative
          Length = 783

 Score = 80.1 bits (196), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/58 (55%), Positives = 42/58 (72%)

Query: 1   LIAEAWDAGGLYQVGCFPHWQIWSEWNGKYRDIVRQFIKGTDGFSGAFAECLCGSPEL 58
           +I+E WD GGLY VG FP+W  W+EWNG YRD +R++IKG  G  G+FA  + GS +L
Sbjct: 480 IISEPWDCGGLYLVGKFPNWDRWAEWNGMYRDDIRRYIKGDSGMKGSFATRVAGSADL 537