Jatropha Genome Database

JcCB0245051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0245051.10 - phase: 0 /partial
         (73 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29692.m000529 phosphoglucomutase, putative                            139   2e-34
30147.m014138 phosphoglucomutase, putative                             84   2e-17
32531.m000025 phosphoglucomutase, putative                             82   8e-17

>29692.m000529 phosphoglucomutase, putative
          Length = 581

 Score =  139 bits (351), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 66/72 (91%), Positives = 70/72 (97%)

Query: 2  VVFKVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVVS 61
          +VF+VSRV TTPFDGQKPGTSGLRKKVKVF QPNYLHNFVQ+TF+ALTAEKVRGATLVVS
Sbjct: 1  MVFEVSRVSTTPFDGQKPGTSGLRKKVKVFTQPNYLHNFVQSTFDALTAEKVRGATLVVS 60

Query: 62 GDGRYFSKDAIQ 73
          GDGRYFSKDAIQ
Sbjct: 61 GDGRYFSKDAIQ 72


>30147.m014138 phosphoglucomutase, putative
          Length = 631

 Score = 83.6 bits (205), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/66 (57%), Positives = 50/66 (75%)

Query: 5   KVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVVSGDG 64
           K++ + T P +GQK GTSGLRKKVKVF+Q NYL N++QA FN+L  E  +   LV+ GDG
Sbjct: 76  KINSLPTKPIEGQKTGTSGLRKKVKVFMQENYLANWIQALFNSLPPEDYKNGLLVLGGDG 135

Query: 65  RYFSKD 70
           RYF+K+
Sbjct: 136 RYFNKE 141


>32531.m000025 phosphoglucomutase, putative
          Length = 288

 Score = 81.6 bits (200), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 2/68 (2%)

Query: 6  VSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVVSGDGR 65
          +  + TTPF GQ+PGTSGLRKKV VF QP+YL NFVQ  F+ L      G TLV+ GDGR
Sbjct: 3  IQTISTTPFPGQRPGTSGLRKKVSVFQQPHYLENFVQGVFDTLG--DCAGKTLVLGGDGR 60

Query: 66 YFSKDAIQ 73
          Y ++ A+Q
Sbjct: 61 YHNRVAVQ 68