Jatropha Genome Database

JcCB0244361.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0244361.30 + phase: 2 /pseudo/partial
         (103 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29577.m000452 strictosidine synthase, putative                        174   8e-45
30221.m002257 strictosidine synthase, putative                        108   6e-25
28094.m000175 strictosidine synthase, putative                        105   4e-24
30138.m003846 strictosidine synthase, putative                         91   8e-20
28094.m000178 strictosidine synthase, putative                         83   3e-17
29830.m001424 Adipocyte plasma membrane-associated protein, puta...    47   2e-06
29830.m001423 Adipocyte plasma membrane-associated protein, puta...    46   3e-06

>29577.m000452 strictosidine synthase, putative
          Length = 372

 Score =  174 bits (441), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 78/95 (82%), Positives = 89/95 (93%)

Query: 1   SEKLCSRGVDSTTSKQWKYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPL 60
           SEK+C++GVDSTT+KQWK+E+ CGRPLGLRFDK TGNLY+AD+YYGL+V+GPEGGLA PL
Sbjct: 90  SEKICAKGVDSTTAKQWKHEKRCGRPLGLRFDKNTGNLYVADSYYGLLVIGPEGGLAKPL 149

Query: 61  ATHAGGKPILFANDLDLHENGSIFFTDTSKRYDRV 95
           AT   GKPILFANDLD+HENGSIFFTDTSKRYDRV
Sbjct: 150 ATQVAGKPILFANDLDIHENGSIFFTDTSKRYDRV 184


>30221.m002257 strictosidine synthase, putative
          Length = 391

 Score =  108 bits (269), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 51/77 (66%), Positives = 62/77 (80%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDL 77
           K E +CGRPLGLRF+KKTG+LYIADAY+GLM VGPEGGLA  LAT A G  + F NDLD+
Sbjct: 125 KNEHICGRPLGLRFNKKTGDLYIADAYFGLMKVGPEGGLATSLATEAEGIKLGFTNDLDI 184

Query: 78  HENGSIFFTDTSKRYDR 94
            + G+I+FTD+S +Y R
Sbjct: 185 DDEGNIYFTDSSTQYQR 201


>28094.m000175 strictosidine synthase, putative
          Length = 372

 Score =  105 bits (263), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 1/78 (1%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDL 77
           + E VCGRPLGLRFDKKTG+LYIADAY GL VVGP GGLA P+ +   G P+ F ND+D+
Sbjct: 106 ELEHVCGRPLGLRFDKKTGDLYIADAYLGLQVVGPNGGLATPVVSEVEGHPLRFTNDMDI 165

Query: 78  HE-NGSIFFTDTSKRYDR 94
            E N  I+FTDTSK + R
Sbjct: 166 DEQNDVIYFTDTSKIFQR 183


>30138.m003846 strictosidine synthase, putative
          Length = 352

 Score = 91.3 bits (225), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 1/82 (1%)

Query: 14  SKQWKYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFAN 73
           S+    E +CGRPLGL+F   T +LY+ADAY+GL+ VGP GG+A  LAT A G P+ F N
Sbjct: 110 SENTDLEPICGRPLGLKFHPATCDLYVADAYFGLLKVGPNGGVATRLATSAEGVPLKFTN 169

Query: 74  DLDLHEN-GSIFFTDTSKRYDR 94
           DLD+  N G ++FTD+S  Y+R
Sbjct: 170 DLDIDPNSGVVYFTDSSVHYER 191


>28094.m000178 strictosidine synthase, putative
          Length = 375

 Score = 83.2 bits (204), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 2/89 (2%)

Query: 8   GVDSTTSKQWKYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGK 67
           G +     Q++ E +CGRPLGL F++  G+LY+ADAY GL+ VG +GGLA  +ATH    
Sbjct: 99  GCEGPHVDQYQMEHICGRPLGLCFNESNGDLYVADAYMGLLKVGRDGGLATTIATHGDDD 158

Query: 68  -PILFANDLDLHENGS-IFFTDTSKRYDR 94
            P  F N LD+  + S ++FTD+S RY R
Sbjct: 159 IPFNFTNSLDVDPSSSALYFTDSSSRYQR 187


>29830.m001424 Adipocyte plasma membrane-associated protein,
           putative
          Length = 380

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 4/71 (5%)

Query: 24  GRPLGLRFDKKTGN-LYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLHENGS 82
           GRPLGL      GN + +ADA+ GL+ +  +GG+ + L   A G      + +D+ E+G+
Sbjct: 128 GRPLGLALGH--GNEVLVADAFEGLLKINGDGGIEL-LTNEAEGIKFKLTDGVDIAEDGT 184

Query: 83  IFFTDTSKRYD 93
           I+FTD S +YD
Sbjct: 185 IYFTDASYKYD 195


>29830.m001423 Adipocyte plasma membrane-associated protein,
           putative
          Length = 312

 Score = 46.2 bits (108), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 24  GRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLHENGSI 83
           GRPLGL    + G + +ADAY GL+ +   G + + L   A G      + + + E+G+I
Sbjct: 123 GRPLGLALGHR-GEVIVADAYKGLLKISRNGAVEL-LTDEAEGVKFKLTDGVAVAEDGTI 180

Query: 84  FFTDTSKRYD 93
           +FTD S +YD
Sbjct: 181 YFTDASHKYD 190