Jatropha Genome Database

JcCB0244361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0244361.10 + phase: 0 /partial
         (124 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29577.m000452 strictosidine synthase, putative                        159   4e-40
30221.m002257 strictosidine synthase, putative                         64   2e-11
30138.m003846 strictosidine synthase, putative                         62   4e-11
28094.m000175 strictosidine synthase, putative                         62   5e-11
28094.m000178 strictosidine synthase, putative                         55   9e-09

>29577.m000452 strictosidine synthase, putative
          Length = 372

 Score =  159 bits (401), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 72/88 (81%), Positives = 82/88 (93%)

Query: 37  MGPLGRHDFRPVKHEVAPYKKVMGSWPRDEKGRLGNGKLEFVNEVFGPESLEFDAIGNGP 96
           MGPLGRHDFRPV+H+VAPYK+VM +WPRD++ RLG GKLEFV+EVFGPESLEFD++G GP
Sbjct: 1   MGPLGRHDFRPVEHDVAPYKQVMENWPRDKEARLGTGKLEFVDEVFGPESLEFDSLGRGP 60

Query: 97  YTGLADGRVVRWMGEDVGWETFAVVTTN 124
           Y GLADGR+VRWMGE VGWETFAVVTTN
Sbjct: 61  YAGLADGRIVRWMGEAVGWETFAVVTTN 88


>30221.m002257 strictosidine synthase, putative
          Length = 391

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)

Query: 32  MDPFKMGPLGRH-DFRPVKHEVAPYKKVMGSWPRDEKGRLGNGKLEFVNEVFGPESLEFD 90
           +DPFK   +    DF+  K ++  +  V     +D    L   +++F+N++ GPES+ FD
Sbjct: 20  IDPFKHSAISEFPDFKAFKVDLPDWSLVPNE--KDNDNLLQRSEIKFLNQIQGPESMAFD 77

Query: 91  AIGNGPYTGLADGRVVRWMGEDVGWETFAVVTTN 124
            +G GPYTG+ADGR+V W G  + W  FA  + N
Sbjct: 78  PLGRGPYTGIADGRIVFWDG--LKWIDFAYTSPN 109


>30138.m003846 strictosidine synthase, putative
          Length = 352

 Score = 62.4 bits (150), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 81  VFGPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVTTN 124
           V GPESL FD  GNGPY G++DGR++RW G+  GW  FA+ + N
Sbjct: 60  VLGPESLAFDCNGNGPYAGVSDGRILRWQGQGKGWVEFAITSAN 103


>28094.m000175 strictosidine synthase, putative
          Length = 372

 Score = 62.4 bits (150), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 37/55 (67%)

Query: 70  LGNGKLEFVNEVFGPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVTTN 124
           L + K+  +    GPESL FD  G GPYTG+ADGR+++W G+ +GW  FA  T+N
Sbjct: 41  LHSAKIVPITGAVGPESLVFDPNGEGPYTGVADGRILKWQGDSLGWTDFAFTTSN 95


>28094.m000178 strictosidine synthase, putative
          Length = 375

 Score = 55.1 bits (131), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/40 (52%), Positives = 28/40 (70%)

Query: 83  GPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVT 122
           GPES  FD +G GPYTG++DGR++RW   +  W  FAV +
Sbjct: 55  GPESFAFDGLGRGPYTGISDGRIIRWEEHEQRWIDFAVTS 94