Jatropha Genome Database

JcCB0240711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0240711.10 + phase: 2 /partial
         (71 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

36771.m000012 longevity assurance factor, putative                    138   4e-34
30174.m009049 longevity assurance factor, putative                    110   1e-25
29801.m003184 longevity assurance factor, putative                     67   1e-12

>36771.m000012 longevity assurance factor, putative
          Length = 265

 Score =  138 bits (348), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 1   YEVVQTLDKQRHRVEGPIYYYVFNTLLYCLLVLHIYWWVLIYRMLVKQIQARGQISEDVR 60
           YEVVQTLDK +H ++GPIYYYVFN+LLYCLLVLHIYWWVLIYRMLVKQIQARGQ+SEDVR
Sbjct: 195 YEVVQTLDKDKHPLDGPIYYYVFNSLLYCLLVLHIYWWVLIYRMLVKQIQARGQLSEDVR 254

Query: 61  SDSEGEDEHED 71
           SDSEGEDEHED
Sbjct: 255 SDSEGEDEHED 265


>30174.m009049 longevity assurance factor, putative
          Length = 308

 Score =  110 bits (276), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/71 (67%), Positives = 65/71 (91%)

Query: 1   YEVVQTLDKQRHRVEGPIYYYVFNTLLYCLLVLHIYWWVLIYRMLVKQIQARGQISEDVR 60
           YEVV TLD ++H V+GP+ YY+FNTLL+C+LV +IYWW+L+ RM+V+QI+ARG++S+DVR
Sbjct: 238 YEVVLTLDMKKHMVDGPLNYYLFNTLLFCILVFNIYWWILMVRMVVEQIKARGKVSDDVR 297

Query: 61  SDSEGEDEHED 71
           SDSEGEDEH+D
Sbjct: 298 SDSEGEDEHDD 308


>29801.m003184 longevity assurance factor, putative
          Length = 315

 Score = 67.4 bits (163), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/42 (64%), Positives = 36/42 (85%)

Query: 20  YYVFNTLLYCLLVLHIYWWVLIYRMLVKQIQARGQISEDVRS 61
           YYVFNT+L  LLV HIYWWVLIY M+++Q++ RG++ ED+RS
Sbjct: 242 YYVFNTMLLMLLVFHIYWWVLIYSMIMRQLRNRGRVGEDIRS 283