Jatropha Genome Database

JcCB0238621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0238621.10 - phase: 0 /pseudo/partial
         (145 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29848.m004567 aspartate aminotransferase, putative                     80   4e-16

>29848.m004567 aspartate aminotransferase, putative
          Length = 464

 Score = 79.7 bits (195), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 5/115 (4%)

Query: 19  VHETLKGKVRHGTGSLTTWFNKEKANRFRNTKSPGRISMAIAVNVSRFEGITMAPLIQFL 78
           +H+TLK KVR G+GS+ TWF K+K + F  TKS GRISM  AVN+SRFEGITMA     L
Sbjct: 17  MHDTLKEKVRLGSGSIGTWFTKDKVHSFMKTKSSGRISMTAAVNISRFEGITMALPDPIL 76

Query: 79  VYQKLFEQTQMIXNSTLELGP---TELKSYILMFSMLLRRQRILCWRGVNIKRYP 130
              + F          L +G     EL  Y+L   ++ + + ++  RG N +  P
Sbjct: 77  GVSEAFRADNDAKKLNLGVGAYRTEELHPYVL--DVVKKAENLMLERGENKEYLP 129