Jatropha Genome Database

JcCB0237641.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0237641.10 - phase: 0 
         (371 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29646.m001058 geranyl geranyl pyrophosphate synthase, putative        577   e-165
27451.m000253 geranyl geranyl pyrophosphate synthase, putative        412   e-115
30091.m000229 geranyl geranyl pyrophosphate synthase, putative        232   2e-61
29989.m000426 solanesyl diphosphate synthase, putative                123   1e-28
27777.m000285 geranyl geranyl pyrophosphate synthase, putative         94   1e-19
29759.m000284 geranylgeranyl pyrophosphate synthase, putative          85   5e-17
46739.m000013 geranyl geranyl pyrophosphate synthase, putative         71   9e-13

>29646.m001058 geranyl geranyl pyrophosphate synthase, putative
          Length = 369

 Score =  577 bits (1486), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 306/373 (82%), Positives = 328/373 (87%), Gaps = 6/373 (1%)

Query: 1   MTSVNLGSWFHSCCVLNQATRSRSNSKSFSLPFNPLKRLSIPLFYENSKRPSSSISAIIT 60
           M+SVNLGSW H+  + NQA+RSRS S S     NPLK L IP+    S++P S I+AIIT
Sbjct: 1   MSSVNLGSWVHTSSIFNQASRSRSKSFSS----NPLKGLQIPVLCSKSRKPISFIAAIIT 56

Query: 61  REEETLQDEQNN-GSTPP-FDFKSYMRQKAASINQALEAAVSVREPAKIHESMRYSLLAG 118
           +EE+TLQ+EQ+N  S PP FDFKSYM QKAASINQAL+AAV +REP KIHESMRYSLLAG
Sbjct: 57  KEEKTLQEEQDNFNSRPPTFDFKSYMLQKAASINQALDAAVPIREPTKIHESMRYSLLAG 116

Query: 119 GKRVRPALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHI 178
           GKRVRPALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHI
Sbjct: 117 GKRVRPALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHI 176

Query: 179 VFGENVAVLAGDALLAFAFEHIAVSTLNVPPARVVRAIGELAKAIGAEGLVAGQVVDICS 238
           VFGE+VAVLAGDALLA AFEHIA++TLNV PAR+VRA+GELAKAIGAEGLVAGQVVDICS
Sbjct: 177 VFGEDVAVLAGDALLALAFEHIAIATLNVSPARIVRAVGELAKAIGAEGLVAGQVVDICS 236

Query: 239 EGLSEVDLEKLEFIHVHKTAKXXXXXXXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDD 298
           EGLSEV LEKLEFIHVHKTAK               TDEEVEKLRKYARDIGLLFQVVDD
Sbjct: 237 EGLSEVGLEKLEFIHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDD 296

Query: 299 ILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAQKLNKEAQEQLAGFDHEKAAP 358
           ILDVTKSSQELGKTAGKDLVADKVTYPKL+GI+KSREFA+KLNKEAQEQLAGFD EKAAP
Sbjct: 297 ILDVTKSSQELGKTAGKDLVADKVTYPKLMGIDKSREFAEKLNKEAQEQLAGFDPEKAAP 356

Query: 359 LIALANYIAYRQN 371
           LIALANYIAYRQN
Sbjct: 357 LIALANYIAYRQN 369


>27451.m000253 geranyl geranyl pyrophosphate synthase, putative
          Length = 372

 Score =  412 bits (1058), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/296 (66%), Positives = 235/296 (79%), Gaps = 1/296 (0%)

Query: 76  PPFDFKSYMRQKAASINQALEAAVSVREPAKIHESMRYSLLAGGKRVRPALCLAACELVG 135
           P F F+ YM  KA  +N+AL+ A+ ++ P KIH++MRYSLLAGGKRVRP LC+AACELVG
Sbjct: 78  PAFPFEEYMATKAKHVNKALDEAIPLQNPVKIHDAMRYSLLAGGKRVRPVLCIAACELVG 137

Query: 136 GNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAF 195
           G+E+ AMPAACA+EMIHTMSLIHDDLPCMDNDDLRRGKPTNH +FGE  A+LAGDALL+F
Sbjct: 138 GDEATAMPAACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAGDALLSF 197

Query: 196 AFEHIAVSTLNVPPARVVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEFIHVH 255
           +FEH+A ST NV P RVVRAI EL  A+G+EGLVAGQ+VDI SEG  +V +  LE+IH+H
Sbjct: 198 SFEHVARSTKNVSPDRVVRAIAELGSAVGSEGLVAGQIVDIDSEG-KDVSVSDLEYIHIH 256

Query: 256 KTAKXXXXXXXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGK 315
           KTAK                DE VE++RKYAR IGLLFQVVDDILDVTKSS+ELGKTAGK
Sbjct: 257 KTAKLLEASVVCGAILGGADDESVERVRKYARCIGLLFQVVDDILDVTKSSEELGKTAGK 316

Query: 316 DLVADKVTYPKLLGIEKSREFAQKLNKEAQEQLAGFDHEKAAPLIALANYIAYRQN 371
           DL+ DK TYPKL+GI+++R+ A KL  +A ++LA FD  KAAPL   ANYIA RQN
Sbjct: 317 DLITDKATYPKLMGIDEARKLAAKLVDQANQELAYFDSAKAAPLYHFANYIASRQN 372


>30091.m000229 geranyl geranyl pyrophosphate synthase, putative
          Length = 345

 Score =  232 bits (592), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 122/297 (41%), Positives = 180/297 (60%), Gaps = 16/297 (5%)

Query: 78  FDFKSYMRQKAASINQALEAAVSVREPAKIHESMRYSLLA-GGKRVRPALCLAACELVGG 136
           FD K+Y     A INQ L+ A+ V+ P +I+E+MRYS LA G KR  P +C+AACEL GG
Sbjct: 52  FDLKTYWTTLIAEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACELFGG 111

Query: 137 NESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFA 196
           N   A P ACA+EM+HT SLIHDDLPCMD+D  RRG+P+NH ++G ++A+LAGDAL    
Sbjct: 112 NRLAAFPTACALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLG 171

Query: 197 FEHIAVSTLN--VPPARVVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEFIHV 254
           + HI   T    VP  R++R I E+A+A+G+ G+ AGQ +D+  EG        +EF   
Sbjct: 172 YRHIVSHTPTGLVPEPRLLRVIAEIARAVGSTGMAAGQFLDL--EGGPSF----VEFAQE 225

Query: 255 HKTAKXXXXXXXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAG 314
            K  +                D+E+++LR+Y R +G+L+QV+DD+L+    ++E      
Sbjct: 226 KKYGEMSECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYQVIDDVLEAKAMNKE-----N 280

Query: 315 KDLVADKVTYPKLLGIEKSREFAQKLNKEAQEQLAGFDH--EKAAPLIALANYIAYR 369
           ++   +  +Y  L GIEK+ E A++L  +A+++L GF    +   PL +  +Y A R
Sbjct: 281 EEKRRNGKSYVSLYGIEKAMEVAEELRTQAKKELDGFAKYGDSVMPLYSFVDYAADR 337


>29989.m000426 solanesyl diphosphate synthase, putative
          Length = 420

 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 132/260 (50%), Gaps = 18/260 (6%)

Query: 90  SINQALEAAVSVREPAKIHESMRYSLLAGGKRVRPALCL----AACELVGGNESMAMPAA 145
           ++NQ L   V    P  +  +      AGGKR+RPAL      A  E++G  E       
Sbjct: 111 TLNQNLRLIVGAENPV-LMSAAEQIFGAGGKRMRPALVFLVARATAEVIGLKELTIKHRR 169

Query: 146 CA--VEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVS 203
            A  +EMIHT SLIHDD+  +D  ++RRGK T H ++G  VA+LAGD + A +  ++A  
Sbjct: 170 LAEIIEMIHTASLIHDDV--LDESNMRRGKETVHQLYGTRVAILAGDFMFAQSSWYLA-- 225

Query: 204 TLNVPPARVVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEFIHVHKTAKXXXX 263
             N+    V++ I ++ K        +G++    S    +V+LE+      +KTA     
Sbjct: 226 --NLENIEVIKLISQVIK-----DFASGEIKQASSLFDCDVELEEYLIKSYYKTASLIAA 278

Query: 264 XXXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 323
                           E++ +Y +++GL FQVVDDILD T+S+++LGK AG DL    +T
Sbjct: 279 STKGAAIFSGVDRSVAEQMYEYGKNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLT 338

Query: 324 YPKLLGIEKSREFAQKLNKE 343
            P +  +EK  +  + +  E
Sbjct: 339 APVIFALEKETKLREIIESE 358


>27777.m000285 geranyl geranyl pyrophosphate synthase, putative
          Length = 308

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 111/228 (48%), Gaps = 14/228 (6%)

Query: 89  ASINQALEAAVSVREPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNESMAMPAACAV 148
           A I   L+ A+ VR P  + E M +   A  +   PALC+AACELVGG+   A+ AA A+
Sbjct: 54  ADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPALCIAACELVGGSRDQALAAASAL 113

Query: 149 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVSTLNVP 208
            ++   +  H+++P  D       +P  H  FG N+ +L GD ++ FAFE +A   LN P
Sbjct: 114 RLMIAAAFTHENIPLTDRPR-PSARPMFHHTFGPNIELLTGDGMIPFAFELLA--QLNNP 170

Query: 209 PA----RVVRAIGELAKAIGAEGLVAGQVVDI---CSEGLSEVDLEKLEFIHVHKTAKXX 261
                 R++R + E+++A+G++G+V GQ  +     S G     +  L  +   K     
Sbjct: 171 AQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVGDELFHVAWLRDVCKKKEGASH 230

Query: 262 XXXXXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQEL 309
                         +EE+EKLR+Y    GL    +  I +  + ++E 
Sbjct: 231 ACAGACGAILGGGNEEEIEKLRRY----GLYVGTIQGIYNKVEGNEEW 274


>29759.m000284 geranylgeranyl pyrophosphate synthase, putative
          Length = 417

 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 115/261 (44%), Gaps = 41/261 (15%)

Query: 101 VREPAKIHESMRYSLLAG--GKRVRPALCL---------------------AACELVGGN 137
           V E  K+  +  Y    G  GKR RP + L                      A EL    
Sbjct: 99  VAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVHIPEPTPTGVGDVVATELRARQ 158

Query: 138 ESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAF 197
           +S+A       EMIH  SL+HDD+  +D+ D RRG  + + V G  VAVLAGD LL+ A 
Sbjct: 159 QSIAE----ITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVAVLAGDFLLSRAC 212

Query: 198 EHIAVSTLNVPPARVVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEFIHVHKT 257
             +A+++L     +    +  LA  +  E LV G+ + + S       +E       +KT
Sbjct: 213 --VALASL-----KNTEVVSLLATVV--EHLVTGETMQMTSTSEQRCSMEYYMQKTYYKT 263

Query: 258 AKXXXXXXXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDL 317
           A                T E      +Y +++GL FQ++DD+LD T +S  LGK +  D+
Sbjct: 264 ASLISNSCKAIALLAGQTAEVAMLAFEYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDI 323

Query: 318 VADKVTYPKLLGIEKSREFAQ 338
               VT P L  +E   EF Q
Sbjct: 324 RHGIVTAPILFAME---EFPQ 341


>46739.m000013 geranyl geranyl pyrophosphate synthase, putative
          Length = 263

 Score = 70.9 bits (172), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 11/181 (6%)

Query: 145 ACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVST 204
           A  +E IHT +L+HDD+  +D   LRRG+ T +  +G   +VL GD L + AF+ + V  
Sbjct: 42  AGIIEFIHTATLLHDDV--VDISSLRRGRATANAKWGNAPSVLVGDFLYSRAFQ-LLVEL 98

Query: 205 LNVPPARVVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEFIHVHKTAKXXXXX 264
            ++P   ++        A     +  G+V+ +   G    D E    +   KTA      
Sbjct: 99  GSMPLMSLM--------ADTTNTIAEGEVLQLTKAGDPATDEEAYFSVIESKTAVLFAAA 150

Query: 265 XXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTY 324
                     + E+  + R+Y  ++G  FQ+ DD+LD     +++GK  G DL   K T 
Sbjct: 151 TEGAAILSGASTEDAARWRRYGLNLGNAFQLADDVLDYLGDPEKMGKNIGDDLAEGKPTL 210

Query: 325 P 325
           P
Sbjct: 211 P 211