Jatropha Genome Database

JcCB0232511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0232511.10 + phase: 0 
         (236 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29815.m000489 threonine dehydratase/deaminase, putative               436   e-123
51181.m000013 threonine dehydratase/deaminase, putative               103   6e-23

>29815.m000489 threonine dehydratase/deaminase, putative
          Length = 618

 Score =  436 bits (1122), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/236 (87%), Positives = 216/236 (91%)

Query: 1   MFEEKRSIXXXXXXXXXXXXXXYCKYYGLQGKNVVAITSGANMNFDKLRVVTELANVGRQ 60
           MFEEKRSI              YCKYYGL+GKNVVAITSGANMNFDKLR+VTELANVGRQ
Sbjct: 383 MFEEKRSILEPAGALALAGAEAYCKYYGLEGKNVVAITSGANMNFDKLRIVTELANVGRQ 442

Query: 61  QEAVLATVMPEEPGMFKRFCELVGPMNITEFKYRCNSEKEAVVLYSVGLHTVSEIEALQQ 120
           QEAVLATVMPEEPGMFKRFCELVGPMNITEFKYRC+SEKEAVVLYSVGLHTV EI+ALQQ
Sbjct: 443 QEAVLATVMPEEPGMFKRFCELVGPMNITEFKYRCSSEKEAVVLYSVGLHTVFEIQALQQ 502

Query: 121 RMESSQLRTYNLTSSDLVKDHLRYLMGGRLNVQNEVLCHFVFPERPGALMKFLDTFSPRW 180
           RME+SQLRTYNLTSSDLVKDHLRYLMGGRLNVQNEVLC FVFPERPGALMKFLD FSPRW
Sbjct: 503 RMEASQLRTYNLTSSDLVKDHLRYLMGGRLNVQNEVLCQFVFPERPGALMKFLDAFSPRW 562

Query: 181 NISLFHYRGQGETGANVLVGIQVPEHEMDEFHSRANSVGYDYDLVTDDDNFQLLMH 236
           NISLFHYRGQGETGAN+LVGIQVPE EM+EFHSRANSVGY Y +VTDD+NFQLLMH
Sbjct: 563 NISLFHYRGQGETGANILVGIQVPESEMEEFHSRANSVGYGYVVVTDDNNFQLLMH 618


>51181.m000013 threonine dehydratase/deaminase, putative
          Length = 306

 Score =  103 bits (257), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 72/125 (57%)

Query: 1   MFEEKRSIXXXXXXXXXXXXXXYCKYYGLQGKNVVAITSGANMNFDKLRVVTELANVGRQ 60
           +FE+ RSI              Y + + LQGK ++A+ SGANMNFD+LR + E A +G  
Sbjct: 178 VFEDTRSILEPAGALALAGLKAYSEKHQLQGKTMIAVASGANMNFDRLRFIAERAELGEH 237

Query: 61  QEAVLATVMPEEPGMFKRFCELVGPMNITEFKYRCNSEKEAVVLYSVGLHTVSEIEALQQ 120
           +EAV A  +PE PG FK FC  +G  NITEF YR +  K+A +   + +H  +E   +  
Sbjct: 238 REAVFAVTIPETPGAFKAFCRQLGNRNITEFNYRFSDAKQAHIFVGLAVHNPAEAAEIAN 297

Query: 121 RMESS 125
            +E++
Sbjct: 298 TLEAA 302