Jatropha Genome Database

JcCB0231041.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0231041.10 - phase: 0 /partial
         (202 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30140.m000573 Phytol kinase 1, chloroplast precursor, putative        346   5e-96
27916.m000158 Phytol kinase 1, chloroplast precursor, putative        149   6e-37

>30140.m000573 Phytol kinase 1, chloroplast precursor, putative
          Length = 304

 Score =  346 bits (887), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 161/187 (86%), Positives = 179/187 (95%)

Query: 1   KLNRKLVHISIGLVFMLCWPLFSSGHRGAILAALTPGINIFRMLILGLGIWKDEATVKSM 60
           KLNRKLVHISIGLVFMLCWPLFSSGH+GAILAALTPG+NIFRML+LGLGIWKDEATVKSM
Sbjct: 103 KLNRKLVHISIGLVFMLCWPLFSSGHQGAILAALTPGVNIFRMLLLGLGIWKDEATVKSM 162

Query: 61  SRFGDHRELLKGPLYYALTITLTCAIYWRTSPITIAAICNLCAGDGMADIVGRRFGNHKL 120
           SRFGDHRELLKGPLYYALTITL CAIYWRTSPI IAAICNLCAGDG+ADIVGRRFG  K+
Sbjct: 163 SRFGDHRELLKGPLYYALTITLACAIYWRTSPIAIAAICNLCAGDGIADIVGRRFGRQKI 222

Query: 121 PYNTNKSIAGSVAMALAGFLASITYMHYFASFGYVRESWEMTMGFLVVSIASAIVESLPI 180
           PYN +KSIAGS+AMALAGF+AS+ +M+YFASFGY+R+S+EM +GFLVVS+AS +VESLPI
Sbjct: 223 PYNRDKSIAGSIAMALAGFIASVMFMYYFASFGYLRKSYEMILGFLVVSLASTLVESLPI 282

Query: 181 STQLDDN 187
           ST+LDDN
Sbjct: 283 STELDDN 289


>27916.m000158 Phytol kinase 1, chloroplast precursor, putative
          Length = 249

 Score =  149 bits (377), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 68/144 (47%), Positives = 101/144 (70%)

Query: 2   LNRKLVHISIGLVFMLCWPLFSSGHRGAILAALTPGINIFRMLILGLGIWKDEATVKSMS 61
           L+RKLVHI  GL+F + WP+FS+       A++ P +N  R++I GL +  DE  +KS++
Sbjct: 105 LSRKLVHILSGLLFAVSWPIFSNSVEARYFASIVPLVNCLRLVINGLTLATDEGLIKSVT 164

Query: 62  RFGDHRELLKGPLYYALTITLTCAIYWRTSPITIAAICNLCAGDGMADIVGRRFGNHKLP 121
           R G+ +ELL+GPLYY L +     ++WR SP+ + A+  +C GDG+ADI+GRRFG+ KLP
Sbjct: 165 REGNPKELLRGPLYYVLVLIFCALVFWRESPVGVMALAMMCGGDGVADIMGRRFGSAKLP 224

Query: 122 YNTNKSIAGSVAMALAGFLASITY 145
           +N  KS AGS++M ++GFL SI +
Sbjct: 225 HNHQKSWAGSISMFISGFLISIGF 248