Jatropha Genome Database

JcCB0226591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0226591.10 + phase: 1 /partial
         (213 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m009040 conserved hypothetical protein                          289   5e-79
29822.m003482 Protein C10orf22, putative                              194   2e-50
30072.m000957 conserved hypothetical protein                          128   2e-30
48762.m000011 conserved hypothetical protein                           66   1e-11

>30174.m009040 conserved hypothetical protein
          Length = 165

 Score =  289 bits (740), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 135/165 (81%), Positives = 149/165 (90%)

Query: 49  FTMCIFCFPTSSVIPLHDHPGMTVFSKILYGSLHVKAYDWVEPTCILEGKESGNPPVKLA 108
             MCIFCFPTSSVIPLHDHPGMTVFSK+LYGSLHVKAYDWV+PTCI + K S  P VKLA
Sbjct: 1   MQMCIFCFPTSSVIPLHDHPGMTVFSKLLYGSLHVKAYDWVQPTCIYDSKGSSYPSVKLA 60

Query: 109 KLAVDKVLTAPCGTSILYPKSGGNLHCFTAVTPCAVLDILTPSYREDVGRKCSYYHDYPY 168
           KLAVDKVLTAPCGTS+LYPKSGGN+HCFTAVTPCAVLDILTP Y+ED GRKC+YYHDYPY
Sbjct: 61  KLAVDKVLTAPCGTSVLYPKSGGNVHCFTAVTPCAVLDILTPPYKEDAGRKCTYYHDYPY 120

Query: 169 SPFSSGNGSELGDGKEEDYAWLAEIETPDNLYMRPGIYTGPAVNF 213
           SPFS+G G+E+GD KE DYAWLAEI+TP+ LYMRPG+Y GPA+N 
Sbjct: 121 SPFSTGIGTEIGDEKEGDYAWLAEIDTPEYLYMRPGVYAGPALNL 165


>29822.m003482 Protein C10orf22, putative
          Length = 288

 Score =  194 bits (493), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 103/213 (48%), Positives = 135/213 (63%), Gaps = 15/213 (7%)

Query: 1   TVRPADVGLKEENPDDDRGHGIFGLNRLSRAARWAQPITYIDIYECDSFTMCIFCFPTSS 60
            + P DVGL  E P            RL  A R A PI Y+ I+EC+ F++ IFCFP S 
Sbjct: 86  VITPEDVGLHPEMP----------YFRLPVAGR-APPIRYLHIHECNKFSIGIFCFPPSG 134

Query: 61  VIPLHDHPGMTVFSKILYGSLHVKAYDWVEPTCILEGKESGNPP-VKLAKLAVDKVLTAP 119
           VIPLH+HPGMTVFSK+L+G +H+K+YDWV+   +  G    NP  V+LAK+ +D   TAP
Sbjct: 135 VIPLHNHPGMTVFSKLLFGKMHIKSYDWVDEDSV-NGSAVVNPSEVRLAKVKIDSDFTAP 193

Query: 120 CGTSILYPKSGGNLHCFTAVTPCAVLDILTPSYREDVGRKCSYYHDYPYSPFSSGNGSEL 179
           C   ILYP  GGN+HCFTA T CAVLD+L P Y +  GR C+YY+D+P++ FS  +G  L
Sbjct: 194 CNPCILYPVDGGNMHCFTAATACAVLDVLGPPYSDPEGRHCTYYNDFPFANFSV-DGVSL 252

Query: 180 GDGKEEDYAWLAE-IETPDNLYMRPGIYTGPAV 211
            + + E YAWL E  + PD+  M   +Y GP +
Sbjct: 253 PEEEREGYAWLQERTKQPDDFKMVGELYRGPKI 285


>30072.m000957 conserved hypothetical protein
          Length = 251

 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 43/193 (22%)

Query: 28  LSRAARWAQP---------ITYIDIYECDSFTMCIFCFPTSSVIPLHDHPGMTVFSKILY 78
           LS A ++ QP         +T   IY+CD F++CIF  P ++VIPLH+HPGMTVFSK+L 
Sbjct: 88  LSSALQFFQPKTAVKCTPRVTTTTIYKCDKFSLCIFFLPATAVIPLHNHPGMTVFSKLLL 147

Query: 79  GSLHVKAYDWVEPTCILEGKESGNPPVKLAKLAVDKVLTAPCGTSILYPKSGGNLHCFTA 138
           G++H+K+YDWV P    E  +  N  ++LAKL  + V  APC TS               
Sbjct: 148 GTMHIKSYDWVSPPSADEPVQPSN--LRLAKLVTESVFEAPCNTS--------------- 190

Query: 139 VTPCAVLDILTPSYREDVGRKCSYYHDYPYSPFSSGNGSELGDGKEEDYAWLAEIETPDN 198
                          ED GR CS+Y D+P S  S+G   +L + +   Y WL EIE P+N
Sbjct: 191 ---------------ED-GRDCSHYKDHPCSAISNGE-MKLTEEEGNSYGWLEEIEMPEN 233

Query: 199 LYMRPGIYTGPAV 211
             M    Y GP +
Sbjct: 234 SQMDGIRYLGPQI 246


>48762.m000011 conserved hypothetical protein
          Length = 53

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 34/38 (89%)

Query: 53 IFCFPTSSVIPLHDHPGMTVFSKILYGSLHVKAYDWVE 90
          IFC P SS+IPLH+HPGMTV SK+LYGSL VK+YDW++
Sbjct: 3  IFCMPPSSIIPLHNHPGMTVLSKLLYGSLLVKSYDWLD 40