Jatropha Genome Database

JcCB0225841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0225841.10 + phase: 0 /partial
         (165 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30055.m001577 Beta-ureidopropionase, putative                         308   1e-84
29506.m000170 Beta-ureidopropionase, putative                          56   8e-09

>30055.m001577 Beta-ureidopropionase, putative
          Length = 255

 Score =  308 bits (788), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 151/165 (91%), Positives = 151/165 (91%), Gaps = 9/165 (5%)

Query: 1   ELFEGYYFCQAQREDFFQRAKPYKGHPTILRMQKLAKELGVVIPVSFFEEANNAHYNSIA 60
           ELFEGYYFCQAQREDFFQRAKPYKGHPTI RMQKLAKEL VVIPVSFFEEANNAHYNSIA
Sbjct: 2   ELFEGYYFCQAQREDFFQRAKPYKGHPTISRMQKLAKELDVVIPVSFFEEANNAHYNSIA 61

Query: 61  IIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGV---------EAA 111
           IID DGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGV         EAA
Sbjct: 62  IIDTDGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAA 121

Query: 112 RAMVLQGAEILLYPTAIGSEPQDEGLDSRDHWKRVMQGHAGANLV 156
           RAMVLQGAEILLYPTAIGSEPQD GLDS DHWKRVMQGHAGANLV
Sbjct: 122 RAMVLQGAEILLYPTAIGSEPQDMGLDSHDHWKRVMQGHAGANLV 166


>29506.m000170 Beta-ureidopropionase, putative
          Length = 415

 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 12/137 (8%)

Query: 6   YYFCQAQREDFFQRAKPYKGHPTILRMQKLAKELGVVIPVSFFEEANNAH--YNSIAIID 63
           + FC  ++  + + A+P  G  T   ++   K   V+I      + N+    +N+  +I 
Sbjct: 150 FAFCTREK-SWCEFAEPVDGESTQFLLEYARKYNMVIISPILERDVNHGETLWNTAVVIG 208

Query: 64  ADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVEAA---------RAM 114
             G  +G +RK+HIP    + E  Y+  G+TG  VF+T + KI V             A 
Sbjct: 209 NHGNIIGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETAYGKIAVNICYGRHHPLNWLAF 268

Query: 115 VLQGAEILLYPTAIGSE 131
            L GAEI+  P+A   E
Sbjct: 269 GLNGAEIVFNPSATVGE 285