Jatropha Genome Database

JcCB0224631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0224631.10 - phase: 2 /partial
         (262 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m002075 Ent-kaurene synthase A, chloroplast precursor, put...   341   2e-94
28670.m000104 Ent-kaurene synthase B, chloroplast precursor, put...    52   3e-07
29806.m000953 Ent-kaurene synthase B, chloroplast precursor, put...    48   5e-06
29806.m000952 Ent-kaurene synthase B, chloroplast precursor, put...    48   6e-06

>29647.m002075 Ent-kaurene synthase A, chloroplast precursor,
           putative
          Length = 800

 Score =  341 bits (875), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 167/262 (63%), Positives = 202/262 (77%), Gaps = 7/262 (2%)

Query: 1   WYEECNLGAFGVSKRELLYAYYMAAASIFEPERSKERVAWAKTTILLRTIDAYFNDNSNN 60
           WYEEC LG FGVS+RELL AY++AAASIFEPERSKER+AWAKTT LL TI++YF D SN+
Sbjct: 546 WYEECELGNFGVSRRELLLAYFVAAASIFEPERSKERLAWAKTTTLLHTIESYF-DASNS 604

Query: 61  SVEERKDFVQQFKHGVGAPAGLVNGRKLETKTRQELVGIVLGTLNDVSLDALVAHGTDIS 120
           + E+R  FV +FK+GV +   L N RKLE KT +ELV I +G LNDVSLD L+AHG DIS
Sbjct: 605 TYEQRTAFVHEFKNGVASIPHL-NARKLEVKTNEELVRIAIGILNDVSLDTLLAHGKDIS 663

Query: 121 HSLRHAWEKWLTNWEKEGDRHQGEAELIVKTINLTTGRWVSEELLNYSSKYERFFQLTNR 180
           H LRHAWEKWL  W + G+ HQG  EL+VKTI LT G    +       KY + FQLT++
Sbjct: 664 HDLRHAWEKWLLKWAEGGEIHQGTGELLVKTITLTAGGSTPDH-----HKYAQLFQLTDK 718

Query: 181 ICHQLGHHSKNKVYDRERSTTPEIESDMQELTQLVLQNSSDGMDSNIKQTFFTVVKSFYY 240
           +C+QL H+ KNKV   ++STTPEIESDMQ+L QL +QNSSD +DS IKQTFF V KSFYY
Sbjct: 719 LCYQLAHYRKNKVQGNKKSTTPEIESDMQQLVQLAIQNSSDEIDSEIKQTFFMVAKSFYY 778

Query: 241 TAVCDPGTINYHISKVLFEKVY 262
            A+ DPGT+NYHI++VLFE+VY
Sbjct: 779 QAISDPGTLNYHIARVLFERVY 800


>28670.m000104 Ent-kaurene synthase B, chloroplast precursor,
           putative
          Length = 808

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 1   WYEECNLGAFGVSKRELLYAYYMAAASIFEPERSKERVAWAKTTILLRTIDAYFNDNSNN 60
           W  E  L     ++++L Y Y+ AAA++F PE S  R++WAK  +L   +D +F  +   
Sbjct: 437 WVVEKRLNKLKFARQKLGYCYFSAAATLFAPELSDARLSWAKNGVLTTVVDDFF--DVGG 494

Query: 61  SVEERKDFVQ 70
           SVEE  + +Q
Sbjct: 495 SVEELINLIQ 504


>29806.m000953 Ent-kaurene synthase B, chloroplast precursor,
           putative
          Length = 775

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 66/144 (45%), Gaps = 17/144 (11%)

Query: 1   WYEECNLGAFGVSKRELLYAYYMAAASIFEPERSKERVAWAKTTILLRTIDAYFNDNSNN 60
           W ++  L     +++ +  AY+   +S+F+P  S  R++WA+ T+L   +D +F  + + 
Sbjct: 476 WVKQYGLDKLKYARQTIRSAYFSITSSLFQPNHSDARISWAQNTVLTTVVDDFF--DFSG 533

Query: 61  SVEERKDFVQQFKH-----GVGAPAGLVNGRKLETKTRQELVGIVLGTLNDVSLDALVAH 115
           S+EE  + ++  +       +G           ++K  + L   + G++ND++  A +  
Sbjct: 534 SMEELLNLIELIERWDEHTTIG----------FKSKEVEILFNALYGSVNDLADKAYIVQ 583

Query: 116 GTDISHSLRHAWEKWLTNWEKEGD 139
           G  +   L   W   L    KE +
Sbjct: 584 GRCVKRDLIDIWIILLKTMLKEAE 607


>29806.m000952 Ent-kaurene synthase B, chloroplast precursor,
           putative
          Length = 778

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 65/139 (46%), Gaps = 7/139 (5%)

Query: 1   WYEECNLGAFGVSKRELLYAYYMAAASIFEPERSKERVAWAKTTILLRTIDAYFNDNSNN 60
           W ++C +     +++ + YA +  A+SIF+P+ S  R++WA+ ++L   +D +F  +   
Sbjct: 479 WIKKCGIDQLEYARQTIKYAAFSIASSIFQPKFSDGRISWAQNSVLTTIVDDFF--DYGG 536

Query: 61  SVEERKDFVQQFKHGVGAPAGLVNGRKLETKTRQELVGIVLGTLNDVSLDALVAHGTDIS 120
           S+EE  + ++  +            +++E      L   V  T ND++  A +  G  + 
Sbjct: 537 SMEELVNLIELVQRWDDHTTIGYKSKEVEI-----LFNAVYSTTNDLADKARILQGRCVK 591

Query: 121 HSLRHAWEKWLTNWEKEGD 139
             +  +W   L    KE +
Sbjct: 592 KHMIDSWIFLLKAMLKEAE 610