Jatropha Genome Database
- JcCB0224601.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0224601.10 + phase: 1 /pseudo
(181 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29929.m004752 two-component sensor histidine kinase bacteria, pu... 236 5e-63
27647.m000179 two-component sensor histidine kinase bacteria, pu... 176 7e-45
29889.m003245 sensor histidine kinase, putative 173 5e-44
29929.m004754 two-component sensor histidine kinase bacteria, pu... 159 7e-40
29848.m004559 two-component system sensor histidine kinase/respo... 153 4e-38
29737.m001227 two-component system sensor histidine kinase/respo... 151 2e-37
29986.m001672 two-component sensor histidine kinase bacteria, pu... 135 1e-32
29929.m004753 Two-component response regulator ARR14, putative 120 2e-28
30147.m014309 two-component system sensor histidine kinase/respo... 102 8e-23
30174.m008957 sensor histidine kinase, putative 91 4e-19
29866.m000621 conserved hypothetical protein 69 1e-12
30076.m004450 sensory transduction histidine kinase, putative 68 3e-12
30138.m004044 sensory transduction histidine kinase, putative 65 2e-11
29758.m000642 Two-component response regulator ARR2, putative 61 2e-10
29660.m000765 hypothetical protein 61 3e-10
30130.m000280 sensory transduction histidine kinase, putative 60 4e-10
29805.m001503 sensory transduction histidine kinase, putative 60 5e-10
30054.m000786 transcription factor, putative 56 1e-08
32463.m000046 two-component system sensor histidine kinase/respo... 53 7e-08
27983.m000077 two-component system sensor histidine kinase/respo... 53 9e-08
41955.m000022 sensor histidine kinase, putative 51 3e-07
29736.m002100 two-component sensor protein histidine protein kin... 51 3e-07
31208.m000018 two component sensor and regulator histidine kinas... 50 8e-07
29910.m000941 receptor histidine kinase, putative 49 1e-06
29729.m002374 two-component system sensor histidine kinase/respo... 49 2e-06
30907.m000033 two-component system sensor histidine kinase/respo... 48 2e-06
30147.m014021 two-component sensor protein histidine protein kin... 47 4e-06
28094.m000169 two-component system sensor histidine kinase/respo... 47 5e-06
>29929.m004752 two-component sensor histidine kinase bacteria,
putative
Length = 584
Score = 236 bits (602), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/179 (69%), Positives = 140/179 (78%), Gaps = 20/179 (11%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TTCGLARDAL LLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGE S+
Sbjct: 44 TTCGLARDALYLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSR 103
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDLS 120
+MKG+QHGA DYLLKPIRM++LRN+WQ+V +K+ +VRDIEI+ GMESIQM R G D S
Sbjct: 104 VMKGVQHGACDYLLKPIRMKELRNIWQHV-FRKKIHEVRDIEILEGMESIQMARIGSDHS 162
Query: 121 -----------TSAKKRRD--------PGDISFIEKARVVWSADLHRKFVQAVCQIGLD 160
TS KKR+D G+ S +KARVVWS DLH+KFV+AV QIG D
Sbjct: 163 DDGYLFCGEDLTSVKKRKDIENKHDDKDGESSTTKKARVVWSVDLHQKFVKAVNQIGPD 221
>27647.m000179 two-component sensor histidine kinase bacteria,
putative
Length = 669
Score = 176 bits (445), Expect = 7e-45, Method: Composition-based stats.
Identities = 93/184 (50%), Positives = 123/184 (66%), Gaps = 25/184 (13%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TTC A+ ALNLLRERK +D+V+SDV+MPDMDGFKLLEHVGLEMDLPVIMMS DG S
Sbjct: 70 TTCSQAKVALNLLRERKGCFDVVLSDVHMPDMDGFKLLEHVGLEMDLPVIMMSADGRTSA 129
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGME-SIQMTRNGEDL 119
+M+GI+HGA DYL+KPIR E+L+N+WQ+V + +K + ++IE +E + + R ED
Sbjct: 130 VMRGIRHGACDYLIKPIREEELKNIWQHV-VRKKWHENKEIEHSGSLEDNDRHKRGNEDA 188
Query: 120 STSA------------KKRR-----------DPGDISFIEKARVVWSADLHRKFVQAVCQ 156
++ +KRR D D S +K RVVWS +LH++FV AV Q
Sbjct: 189 EYTSSVNEGTEGVLKGQKRRSNSKDEDDGEPDSDDPSTSKKPRVVWSVELHQQFVSAVNQ 248
Query: 157 IGLD 160
+G+D
Sbjct: 249 LGID 252
>29889.m003245 sensor histidine kinase, putative
Length = 682
Score = 173 bits (438), Expect = 5e-44, Method: Composition-based stats.
Identities = 93/178 (52%), Positives = 124/178 (69%), Gaps = 19/178 (10%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
T C A AL+LLRE K+GYDIVISDV+MPDMDGFKLLEH+GLEMDLPVIMMS D KS
Sbjct: 60 TKCNRAETALSLLRENKNGYDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADEAKSV 119
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMES-IQMTRNGE-- 117
+MKG+ HGA DYL+KP+R+E L+N+WQ+V + +K ++ +D+E +E + + E
Sbjct: 120 VMKGVTHGACDYLIKPVRIEALKNIWQHV-VRKKRNEWKDLEQSGSVEEGDRQPKQSEDA 178
Query: 118 DLSTSA--------KKRR-------DPGDISFIEKARVVWSADLHRKFVQAVCQIGLD 160
D S+SA KKR+ + D S ++K RVVWS +LH++FV AV Q+G+D
Sbjct: 179 DYSSSANEGNWRNSKKRKDEEEEGDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID 236
>29929.m004754 two-component sensor histidine kinase bacteria,
putative
Length = 419
Score = 159 bits (402), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 116/164 (70%), Gaps = 7/164 (4%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TCG +RDALN+LR RKD YDIVI DV DMDGF+LLEH+GL+MD PVI S S
Sbjct: 45 ATCG-SRDALNMLRGRKDEYDIVICDVTTSDMDGFRLLEHIGLKMDCPVINASALXXASA 103
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMT-RNGEDL 119
L KG++HGA DYLLKPIRM++LRN+WQ+V +++ +VR+ EI+ ++ GEDL
Sbjct: 104 LQKGVRHGACDYLLKPIRMKELRNIWQHV-FRKRIHEVRECEILGSDQACDGPLLRGEDL 162
Query: 120 STSAKKRR---DPGDISFIEKARVVWSADLHRKFVQAVCQIGLD 160
+ S KKR+ DIS + AR+VW+ DLH+KFV+AV QIG D
Sbjct: 163 A-SVKKRKYADQKADISSAKMARLVWTVDLHQKFVKAVHQIGFD 205
>29848.m004559 two-component system sensor histidine kinase/response
regulator, putative
Length = 663
Score = 153 bits (387), Expect = 4e-38, Method: Composition-based stats.
Identities = 85/177 (48%), Positives = 113/177 (63%), Gaps = 19/177 (10%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TT A AL +LRE K+ +D+VISDV+MPDMDGFKLLE VGLEMDLPVIM+S +
Sbjct: 45 TTTSQAISALKMLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYSDPKL 104
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDLS 120
+MKGI HGA DYLLKP+R+E+L+N+WQ+V+ +K+D +D + + +GE +
Sbjct: 105 VMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVDN-KDQNNFDNQDKLPRG-SGEATA 162
Query: 121 TSA--KKRRDPG---------------DISFIEKARVVWSADLHRKFVQAVCQIGLD 160
KKR+D D + +K RVVWS +LHRKFV AV Q+G+D
Sbjct: 163 DQKLNKKRKDQNEDEDEDRDEHGHENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVD 219
>29737.m001227 two-component system sensor histidine kinase/response
regulator, putative
Length = 676
Score = 151 bits (381), Expect = 2e-37, Method: Composition-based stats.
Identities = 84/185 (45%), Positives = 109/185 (58%), Gaps = 25/185 (13%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TT A AL +LRE ++ YD+VISDVNMPDMDGFKLLE VGLEMDLPVIM+S +K
Sbjct: 45 TTTNQAIQALKMLRENRNKYDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDKEL 104
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKL-----------DKVRDIEIVAGMES 109
+ KG+ HGA DYLLKP+R+E+L+N+WQ+V+ +KL DK D G
Sbjct: 105 VYKGVTHGAVDYLLKPVRIEELKNIWQHVIRRKKLQPKDQSRSQNQDKPLDGAGEGGQGM 164
Query: 110 IQMTRNGEDLSTSAKKR--------------RDPGDISFIEKARVVWSADLHRKFVQAVC 155
++ + K++ D + +K RVVWS +LHRKFV AV
Sbjct: 165 SSSGSEDQNGKVNRKRKDQDEDEEEEGEDNLNDTDEPGAQKKPRVVWSVELHRKFVAAVN 224
Query: 156 QIGLD 160
Q+GLD
Sbjct: 225 QLGLD 229
>29986.m001672 two-component sensor histidine kinase bacteria,
putative
Length = 473
Score = 135 bits (339), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 110/175 (62%), Gaps = 17/175 (9%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
T C A+DAL++LRE K+ +DIV+ D++MPDMDGF+LLE EM LPV+MMS D +
Sbjct: 62 TKCRKAKDALSMLREDKNKFDIVVIDLHMPDMDGFELLEIAEFEMGLPVVMMSSDDDHEV 121
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMES--IQMTRNGED 118
+ KG+ HGA DYL+KP+RME L+ +WQ+V+ +K ++E + G+E + +T+ D
Sbjct: 122 IKKGVLHGACDYLIKPVRMEALKMIWQHVIRKKKNTAKDELEQLIGLEDDILLLTKPDSD 181
Query: 119 ---------LSTSAKKRRD------PGDISFIEKARVVWSADLHRKFVQAVCQIG 158
+ ++K+RR+ P D + K R++W+ +LH KFV+A +G
Sbjct: 182 DDMIHGNLNNTRNSKRRRNNEYDDEPSDPAATGKKRMIWTEELHEKFVRAFNHLG 236
>29929.m004753 Two-component response regulator ARR14, putative
Length = 338
Score = 120 bits (302), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 107/186 (57%), Gaps = 29/186 (15%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVG----LEMDLPVIMMSVDG 56
TTC ARD L LLRE + GYDIVISDV MP MD F L +G E ++SVDG
Sbjct: 44 TTCCSARDVLALLRENRYGYDIVISDVIMPGMDVFLHLLFIGSMLLTEHLYRFTVISVDG 103
Query: 57 EKSKLMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNG 116
E+S++M+GIQ GA +YLLKPIRM++LRN+ Q+V K+ K DIE + G +QM NG
Sbjct: 104 ERSRVMRGIQLGACEYLLKPIRMKELRNICQHV-FRRKIQKEIDIESIEGTIQVQMAING 162
Query: 117 EDLS-----------TSAKKRRD---------PGDISFIEKARVVWSADLHRKFVQAVCQ 156
D S TS K ++ PG +K+ V++ H+KF +AV Q
Sbjct: 163 LDKSNGGHLLCGENLTSVKIGKEVQNKHDDKGPGGNFSTKKSAVIF----HQKFDKAVNQ 218
Query: 157 IGLDSK 162
IG DSK
Sbjct: 219 IGPDSK 224
>30147.m014309 two-component system sensor histidine kinase/response
regulator, putative
Length = 754
Score = 102 bits (255), Expect = 8e-23, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 98/176 (55%), Gaps = 23/176 (13%)
Query: 8 DALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSKLMKGIQH 67
DAL+ L+ +D+VI+D++MP M+G +L + + E +PV++MS DG++S +++ ++
Sbjct: 55 DALSSLQSSDGAFDLVITDLHMPGMNGIQLQKQIDEEFKIPVVIMSSDGKRSAILESLES 114
Query: 68 GASDYLLKPIRMEQLRNLWQYVLLTEKLDKV--------RDIEIVAGME----------- 108
GA Y++KP+ + L+N+WQY + ++K +V D E A E
Sbjct: 115 GAVYYMVKPVNLRDLKNVWQYAMASKKGKEVVVAEEPENNDGEASASTEKDSCEDNNSAS 174
Query: 109 --SIQMTRNGEDLSTSAKKRRDPGD--ISFIEKARVVWSADLHRKFVQAVCQIGLD 160
+ + + N + + D G+ S +KA+VVW+ LH +F+QA+ IGLD
Sbjct: 175 VSANEESNNKKKKGKKRARDHDQGEDAPSAPKKAKVVWTNSLHNRFLQAINHIGLD 230
>30174.m008957 sensor histidine kinase, putative
Length = 437
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 101/184 (54%), Gaps = 22/184 (11%)
Query: 2 TCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSKL 61
T A DAL++LRER+ D+++++V++PDMD ++LLE + LP++++S D +++ +
Sbjct: 47 TAKRATDALHILRERQYELDLILTEVHLPDMDKYELLETMAEVSCLPIVILSADDDENAM 106
Query: 62 MKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKV-------------------RDIE 102
+ + GA YLLKPI M +++LWQ+ + + + V E
Sbjct: 107 LGCLFKGAVFYLLKPITMNDVKSLWQFSCVKNRKNNVATEGSHSYHGHSTPEIASNEASE 166
Query: 103 IVAGMESIQMT---RNGEDLSTSAKKRRDPGDISFIEKARVVWSADLHRKFVQAVCQIGL 159
++ +++ Q G++L K +F +K +++W+ +LH +F+QA+ +G+
Sbjct: 167 CLSVLDTSQQNAQKSEGKELQEMDKDEEATVTSTFPKKPKLIWTNELHDRFLQAIRILGI 226
Query: 160 DSKY 163
DS +
Sbjct: 227 DSAH 230
>29866.m000621 conserved hypothetical protein
Length = 667
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Query: 9 ALNLLRERKDGYDIVISDVNMPDMDGFKLL----EHVGLEMDLPVIMMSVDGEKSKLMKG 64
A +L+ + D+++++V +P + G+ LL EH + ++PVIMMS S + K
Sbjct: 79 AWEMLKGKPHNIDLILTEVELPSISGYALLTLIMEH-EICKNIPVIMMSSQDSVSTVYKC 137
Query: 65 IQHGASDYLLKPIRMEQLRNLWQYV 89
+ GA+DYL+KPIR +LRNLWQ+V
Sbjct: 138 MMRGAADYLVKPIRKNELRNLWQHV 162
>30076.m004450 sensory transduction histidine kinase, putative
Length = 697
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
Query: 9 ALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMD----LPVIMMSVDGEKSKLMKG 64
A L++ + D+++++V++P + G+ LL V +E D +PVIMMS SK++K
Sbjct: 76 AWETLKDGPNNIDLILTEVDLPLISGYALLTLV-MEHDFCKNIPVIMMSSHDSISKVLKC 134
Query: 65 IQHGASDYLLKPIRMEQLRNLWQYVLLTEKL 95
+ GA+D+L+KP+R +L+NLWQ+V + L
Sbjct: 135 MLKGAADFLIKPVRRNELKNLWQHVWRRQTL 165
>30138.m004044 sensory transduction histidine kinase, putative
Length = 550
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 10/119 (8%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGE 57
T+ AR ++ L DI++S+V++P G K+L+++ + +L PVIMMS E
Sbjct: 49 TSVRSARQVIDALNAEGPDIDIILSEVDLPMNKGMKMLKYITRDKELRRIPVIMMSAQDE 108
Query: 58 KSKLMKGIQHGASDYLLKPIRMEQLRNLWQYVL-------LTEKLDKVRDIEIVAGMES 109
S ++K ++ GA+DYL+KP+R +L NLW ++ L EK + D ++VA S
Sbjct: 109 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILIYDFDLVASDPS 167
>29758.m000642 Two-component response regulator ARR2, putative
Length = 659
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 9 ALNLLRERKDGYDIVISDVNMPDMDGF----KLLEHVGLEMDLPVIMMSVDGEKSKLMKG 64
A LL + + D+++S+V MP + G K++ H + ++PVIMMS + + K
Sbjct: 12 AWKLLEDLTNHIDLILSEVAMPCLSGIGLLCKIMNHRTCK-NIPVIMMSSHDSMNVVFKC 70
Query: 65 IQHGASDYLLKPIRMEQLRNLWQYV 89
+ GA D+L+KPIR +L+NLWQ+V
Sbjct: 71 LSKGALDFLVKPIRKNELKNLWQHV 95
>29660.m000765 hypothetical protein
Length = 549
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Query: 12 LLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSKLMKGIQHGASD 71
+++E+K + + +++ NMPDMD +LL H L+ D+PVI++S + K I GAS
Sbjct: 1 MVQEQKGRFKLAMANANMPDMDSLELL-HALLDKDIPVILISSETSVFAARKAIAEGASF 59
Query: 72 YLLKPIRMEQLRNLWQYVLLTEK--LDKVRDIEIVAGMESIQMTRNGEDLS 120
L +PI ++ LR +WQ+ + D+ ++ E+ Q NG ++S
Sbjct: 60 ILHEPISIDDLRYVWQHAYRNRRNAADQTQN-------ETCQEKENGSNIS 103
>30130.m000280 sensory transduction histidine kinase, putative
Length = 807
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 9 ALNLLRERKDGYDIVISDVNMPDMDGFKLL----EHVGLEMDLPVIMMSVDGEKSKLMKG 64
A +L + + D+V+++V MP + G LL H L ++PVIMMS + K
Sbjct: 109 AWKILEDMNNHTDLVLTEVVMPILSGIGLLCKIRNHKTLR-NIPVIMMSSHDSMGIVFKC 167
Query: 65 IQHGASDYLLKPIRMEQLRNLWQYV 89
+ GA D+L+KPIR +L+NLWQ+V
Sbjct: 168 LSKGAVDFLVKPIRKNELKNLWQHV 192
>29805.m001503 sensory transduction histidine kinase, putative
Length = 762
Score = 60.1 bits (144), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 9 ALNLLRERKDGYDIVISDVNMPDMDG----FKLLEHVGLEMDLPVIMMSVDGEKSKLMKG 64
A +L + + D+V+++V MP + G +K++ H ++PVIMMS + K
Sbjct: 123 AWRILEDLTNQIDLVLTEVVMPCLSGIGLLYKIMSH-KTRKNVPVIMMSSHDSMGLVFKC 181
Query: 65 IQHGASDYLLKPIRMEQLRNLWQYV 89
+ GA D+L+KPIR +L+NLWQ+V
Sbjct: 182 LSKGAVDFLVKPIRKNELKNLWQHV 206
>30054.m000786 transcription factor, putative
Length = 478
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 8 DALNLLRERKDGYDIVISDVNMPDMDG-FKLLEHVGLEMDLPVIMMSVDGEKSKLMKGIQ 66
+AL+ + ++ + + + I +V+ + +G FK LE DLP IM S S +MK I
Sbjct: 52 EALSAISDKPESFHVAIVEVSTSNSNGNFKFLE---TAKDLPTIMTSNIHCLSTMMKCIA 108
Query: 67 HGASDYLLKPIRMEQLRNLWQYVL 90
GA ++L KP+ E+LRN+WQ+V+
Sbjct: 109 LGAVEFLRKPLSEEKLRNIWQHVV 132
>32463.m000046 two-component system sensor histidine kinase/response
regulator, putative
Length = 135
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 9 ALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDL-PVIMMSVDGEKSKLMKGIQH 67
A LL D D V+SDV MP MDG LLE V PVI+M+ + M+ ++
Sbjct: 49 AQQLLTRGLDDIDCVVSDVQMPGMDGLTLLERVRASASAPPVILMTAFADDHVRMRALRG 108
Query: 68 GASDYLLKPIRMEQL 82
GA+ +L KP+ EQL
Sbjct: 109 GAACFLAKPVDAEQL 123
>27983.m000077 two-component system sensor histidine kinase/response
regulator, putative
Length = 132
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 19/97 (19%)
Query: 5 LARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMD---LPVIMMSVDGEKSKL 61
LA+DAL G DIV++D NMP M GF LL+ + D LPVI+++ + +K +
Sbjct: 46 LAKDALI-------GIDIVVTDWNMPVMGGFTLLQRIREHPDLHQLPVILVTAEAKKENI 98
Query: 62 MKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKV 98
+ GA Y++KP L+ EK+D+V
Sbjct: 99 ISAAAAGADGYIVKPFNAATLK---------EKIDRV 126
>41955.m000022 sensor histidine kinase, putative
Length = 115
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 19 GYDIVISDVNMPDMDGFKLLEHVGLEMD-LPVIMMSVDGEKSKLMKGIQHGASDYLLKPI 77
YD+ ++D+ +PD G +L++++ + LPV +++ G + ++ GA DY+ KPI
Sbjct: 48 SYDLCLTDMRLPDGLGLELVQYINAQFPGLPVAVITAYGSAENAVSALKAGAYDYITKPI 107
Query: 78 RMEQLRNL 85
++QLR L
Sbjct: 108 SLKQLRPL 115
>29736.m002100 two-component sensor protein histidine protein
kinase, putative
Length = 258
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 21 DIVISDVNMPDMDGFKLLEHV---GLEMDLPVIMMSVDGEKSKLMKGIQHGASDYLLKPI 77
D++I+D MP M G++LL+ + ++PV++MS + +++ + ++ GA D+L+KP+
Sbjct: 84 DLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVMARIDRCLEEGAEDFLVKPV 143
Query: 78 RMEQLRNLWQYVLLTE 93
++ ++ + Y+ E
Sbjct: 144 KLSDVKRIRDYMTARE 159
>31208.m000018 two component sensor and regulator histidine kinase
bacteria, putative
Length = 190
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 16/108 (14%)
Query: 17 KDGYDIVISDVNMPDMDGFKLLEHVGLEMD---LPVIMMSVDGEKSKLMKGIQHGASDYL 73
K+ D+V+ D+ MP +DG + E + +P+IM+S DG++ L++ + G DYL
Sbjct: 60 KNQPDLVLMDMTMPVLDGLQAAEAIRALCGSRWVPIIMISADGKEDALVRALAAGCDDYL 119
Query: 74 LKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDLST 121
LKP+ + +L K+ R + + G ++ R E+L T
Sbjct: 120 LKPVNPQ---------ILAAKISAFRRVADLQG----ELDRQREELQT 154
>29910.m000941 receptor histidine kinase, putative
Length = 185
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 4 GLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMD---LPVIMMSVDGEKSK 60
GL++D ++ DI+++D MP+M+G+ LL V + +PV+++S + + +
Sbjct: 59 GLSQDKVDKSTYNDQKIDIILTDYCMPEMNGYDLLMAVKGHSNVKSIPVVIISSEYDPQR 118
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYV 89
+ + + +GA D+L KP++ + L+ L Y
Sbjct: 119 ISRCLANGAEDFLQKPLQQKDLQKLRSYA 147
>29729.m002374 two-component system sensor histidine kinase/response
regulator, putative
Length = 155
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 4 GLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHV---GLEMDLPVIMMSVDGEKSK 60
GL D N L +++I+D MP M G++LL+ + + ++PV+++S + ++
Sbjct: 62 GLGDDDRNCLENNVSKVNLIITDYCMPGMTGYELLKKIKESSIMKEVPVVIVSSENIPTR 121
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNL 85
+ K ++ GA ++LKP+++ ++ L
Sbjct: 122 INKCLEEGAQMFMLKPLKLSDVKKL 146
>30907.m000033 two-component system sensor histidine kinase/response
regulator, putative
Length = 122
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 7 RDALNLLRERKDGYDIVISDVNMPDMDGF---KLLEHVGLEMDLPVIMMSVDGEKSKLMK 63
+DAL+ L +K ++ISDVNMP+MDG K + + PVIM++ + +SK +
Sbjct: 36 KDALSKLNGQK--IHLIISDVNMPNMDGISFVKAAKQLPAYKFTPVIMLTTEAGESKKAE 93
Query: 64 GIQHGASDYLLKPIRMEQL 82
G GA +++KP + Q+
Sbjct: 94 GQAAGAKAWVVKPFQPAQM 112
>30147.m014021 two-component sensor protein histidine protein
kinase, putative
Length = 221
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 21 DIVISDVNMPDMDGFKLLEHVGLEM---DLPVIMMSVDGEKSKLMKGIQHGASDYLLKPI 77
+++++D +MP M G++LL+ + ++PV++MS + +++ + ++ GA ++++KP+
Sbjct: 83 NLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILTRIDRCLEEGAEEFIVKPV 142
Query: 78 RMEQLRNLWQYVLLTE 93
++ ++ L +V+ E
Sbjct: 143 KLSDVKRLKNFVMRGE 158
>28094.m000169 two-component system sensor histidine kinase/response
regulator, putative
Length = 221
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 21 DIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGEKSKLMKGIQHGASDYLLKPI 77
+++I+D MP M G+ LL+ + L PV++MS + +++ + ++ GA ++ LKP+
Sbjct: 74 NLIITDYCMPGMTGYDLLKKIKESSSLKNIPVVIMSSENVPARITRCLEEGAEEFFLKPV 133
Query: 78 RMEQLRNLWQYVLLTE 93
++ L L +++ T+
Sbjct: 134 QLSDLNRLRPHMMKTK 149