Jatropha Genome Database

JcCB0224421.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0224421.10 - phase: 0 /partial
         (136 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29851.m002399 allantoinase, putative                                  126   3e-30

>29851.m002399 allantoinase, putative
          Length = 500

 Score =  126 bits (316), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/101 (60%), Positives = 72/101 (71%), Gaps = 3/101 (2%)

Query: 1   MDNLQWRIXXXXXXXXXXXXXXYVQNSSKLSHGDCSLLPYKHYWITSKSIVTPQGIISGA 60
           MD+L WR+              Y   S KL++ DCSLLPY H+WI SK+IVTP+G+ISGA
Sbjct: 1   MDHLLWRMLPLLALLASFF---YFFQSQKLTYNDCSLLPYSHFWIISKNIVTPRGVISGA 57

Query: 61  VEVKEGNIVSIVKEEDWQGYSKRGPILDYGEAVVMPGLIDV 101
           VEVKEGNIVS+VKEEDW    KRG ++DYGE VVMPG IDV
Sbjct: 58  VEVKEGNIVSVVKEEDWHVNFKRGHMIDYGEVVVMPGFIDV 98