Jatropha Genome Database

JcCB0224001.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0224001.20 + phase: 0 /partial
         (118 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001423 Adipocyte plasma membrane-associated protein, puta...   151   6e-38
29830.m001424 Adipocyte plasma membrane-associated protein, puta...   143   1e-35
29739.m003743 Adipocyte plasma membrane-associated protein, puta...    47   1e-06

>29830.m001423 Adipocyte plasma membrane-associated protein,
           putative
          Length = 312

 Score =  151 bits (382), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 77/118 (65%), Positives = 83/118 (70%)

Query: 1   MPIHELTDPPPEASMKNGRLLQGSEFLGVGQLKAPEDIAYDGESGVIYTTCADGWIKRXX 60
           MPIHELT P P  +MKN  +L+GSEFLGVGQL APEDI YD  S VIYT C DGWIKR  
Sbjct: 46  MPIHELTHPLPTPTMKNDHILKGSEFLGVGQLLAPEDIVYDTGSKVIYTGCVDGWIKRVT 105

Query: 61  XXXXXXXXXXXXXXXTGGRPLGLVLGKDNDVIVADAYKGLLKISRDGEIELLTDEAEG 118
                          TGGRPLGL LG   +VIVADAYKGLLKISR+G +ELLTDEAEG
Sbjct: 106 INDSVADSVVENWVHTGGRPLGLALGHRGEVIVADAYKGLLKISRNGAVELLTDEAEG 163


>29830.m001424 Adipocyte plasma membrane-associated protein,
           putative
          Length = 380

 Score =  143 bits (361), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 70/118 (59%), Positives = 83/118 (70%)

Query: 1   MPIHELTDPPPEASMKNGRLLQGSEFLGVGQLKAPEDIAYDGESGVIYTTCADGWIKRXX 60
           MPIHELT PP     KN  +L+GSEFLG G+L  PEDIA+D +SG+IYT+CA GWIKR  
Sbjct: 51  MPIHELTRPPANVLTKNAHILKGSEFLGKGELLGPEDIAFDSKSGLIYTSCAGGWIKRVT 110

Query: 61  XXXXXXXXXXXXXXXTGGRPLGLVLGKDNDVIVADAYKGLLKISRDGEIELLTDEAEG 118
                          TGGRPLGL LG  N+V+VADA++GLLKI+ DG IELLT+EAEG
Sbjct: 111 VNDSVTDSVVENWVNTGGRPLGLALGHGNEVLVADAFEGLLKINGDGGIELLTNEAEG 168


>29739.m003743 Adipocyte plasma membrane-associated protein,
           putative
          Length = 356

 Score = 47.4 bits (111), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 6/92 (6%)

Query: 27  LGVGQLKAPEDIAYDGESGVIYTTCADGWIKRXXXXXXXXXXXXXXXXXTGGRPLGLVLG 86
           LG G ++ PED+  D + GV+YT   D WIKR                      LG+   
Sbjct: 54  LGEGFIQGPEDVCMD-KDGVLYTAVRDKWIKRMHKNGSWENWKRIDSDAL----LGIAPS 108

Query: 87  KDNDVIVADAYKGLLKISRDGEIELLTDEAEG 118
           K+  +IV DA  GLLK++ DG + +L  E  G
Sbjct: 109 KEGGLIVCDADTGLLKVTEDG-VTVLASEVNG 139