Jatropha Genome Database

JcCB0223221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0223221.10 + phase: 0 /pseudo
         (269 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29791.m000527 Male sterility protein, putative                        300   5e-82
30055.m001531 Male sterility protein, putative                        297   4e-81
29791.m000526 oxidoreductase, acting on the CH-CH group of donor...   263   5e-71
30055.m001532 oxidoreductase, acting on the CH-CH group of donor...   148   3e-36
28516.m000032 Male sterility protein, putative                        129   2e-30
28902.m000037 Male sterility protein, putative                         98   3e-21
41482.m000013 conserved hypothetical protein                           89   2e-18
30029.m000017 conserved hypothetical protein                           65   3e-11

>29791.m000527 Male sterility protein, putative
          Length = 493

 Score =  300 bits (768), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 142/227 (62%), Positives = 184/227 (81%)

Query: 1   MELEKITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYN 60
           M+L  + +FL++KT+LVTGATG+LAKVF+EK+LRVQPNVKKLYLLLRAAD +S  +R   
Sbjct: 1   MDLGSVIEFLDNKTILVTGATGYLAKVFVEKVLRVQPNVKKLYLLLRAADANSAMERLNK 60

Query: 61  EVIGKDLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNF 120
           EVIGKDLF+V++E+ GA+LNS +++K+  +PGD+S EDLG KDS+LR EM+ D+D ++NF
Sbjct: 61  EVIGKDLFKVLRERYGASLNSFVSEKMTPIPGDISREDLGIKDSNLRNEMLKDIDVVINF 120

Query: 121 AATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQL 180
           AATT FDERYDVALG NTLGA +VL FAK CLK+++L+HVSTAYVCGE +GLI+EKP+ +
Sbjct: 121 AATTNFDERYDVALGINTLGALHVLNFAKKCLKIRMLVHVSTAYVCGEDTGLILEKPFPM 180

Query: 181 GEALNGVLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIER 227
           GE   G   ++I EEKKL+  KLN+L+ E A+E  I   M D GIER
Sbjct: 181 GEGKKGNSKIDIEEEKKLVQEKLNELESENASEKEITAIMKDFGIER 227


>30055.m001531 Male sterility protein, putative
          Length = 493

 Score =  297 bits (760), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 141/227 (62%), Positives = 182/227 (80%)

Query: 1   MELEKITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYN 60
           ME+  I +FLE+KT+L TGATG+LAK+F+EK+LRVQPNVKKLYLLLRAAD  S  +R   
Sbjct: 1   MEVGSILEFLENKTILATGATGYLAKIFVEKVLRVQPNVKKLYLLLRAADADSAMERLNR 60

Query: 61  EVIGKDLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNF 120
           EVIGKDLF+ V+EK G++LNS +++K+  +PGD+S EDLG +D +LR+E++ D+D ++NF
Sbjct: 61  EVIGKDLFKGVREKYGSSLNSFVSEKMTPIPGDISREDLGIEDFNLRDEILKDIDVVINF 120

Query: 121 AATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQL 180
           AATT FDERYDVALG NTLGA NVL FAK CLK+++L+HVSTAYVCGE +GLI+EKP+ +
Sbjct: 121 AATTNFDERYDVALGVNTLGALNVLNFAKKCLKIRMLVHVSTAYVCGEDTGLILEKPFPM 180

Query: 181 GEALNGVLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIER 227
           GEA  G   ++I EEKKL+  KLN+L+ E A+E  I   M D GIER
Sbjct: 181 GEAKKGNRKIDIEEEKKLVQEKLNELESENASEKEITAIMKDFGIER 227


>29791.m000526 oxidoreductase, acting on the CH-CH group of donors,
           putative
          Length = 186

 Score =  263 bits (673), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 123/186 (66%), Positives = 156/186 (83%)

Query: 1   MELEKITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYN 60
           MEL  I +FLE KT+LVTGATG+LAK+F+EK+LRVQPNVKKLYLLLRAAD  S  +R   
Sbjct: 1   MELGSILEFLEKKTILVTGATGYLAKIFVEKVLRVQPNVKKLYLLLRAADADSAMERLKQ 60

Query: 61  EVIGKDLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNF 120
           EVIGKDLF+ V+EK G++LNS +++K+  +PGD+S EDLG +D +LR+E++ D+D ++NF
Sbjct: 61  EVIGKDLFKGVREKYGSSLNSFVSEKMTPIPGDISREDLGIEDFNLRDEILKDIDVVINF 120

Query: 121 AATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQL 180
           AATT FDERYDVALG NTLGA NVL FAK CLK+++L+HVSTAYVCGE +GLI+EKP+ +
Sbjct: 121 AATTNFDERYDVALGVNTLGALNVLNFAKKCLKIRMLVHVSTAYVCGEDTGLILEKPFPM 180

Query: 181 GEALNG 186
           GEA  G
Sbjct: 181 GEAKKG 186


>30055.m001532 oxidoreductase, acting on the CH-CH group of donors,
           putative
          Length = 414

 Score =  148 bits (373), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 84/101 (83%)

Query: 127 DERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQLGEALNG 186
           D +YDVAL  NT+GAK+VLCFAK C++LK+L+HVSTAYV GE  GL+ E PYQ+GE +NG
Sbjct: 50  DAKYDVALDLNTMGAKHVLCFAKKCVRLKVLVHVSTAYVAGEKGGLLQETPYQIGETING 109

Query: 187 VLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIER 227
           V GL+I EEK+L+D KLNQLQ EGAT+  IK+AM DMGI+R
Sbjct: 110 VSGLDIDEEKRLVDEKLNQLQAEGATDDAIKEAMKDMGIQR 150



 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/51 (74%), Positives = 43/51 (84%)

Query: 1  MELEKITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADT 51
          ME   I QFLE K +L+TGATGFLAK+F+EK+LRVQPNVKKLYLLLRA D 
Sbjct: 1  MEFGSILQFLEKKNILITGATGFLAKIFIEKILRVQPNVKKLYLLLRAPDA 51


>28516.m000032 Male sterility protein, putative
          Length = 387

 Score =  129 bits (324), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/232 (35%), Positives = 133/232 (57%), Gaps = 19/232 (8%)

Query: 6   ITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYNEVIGK 65
           I +FL  +   +TGATGFLAK   ++      +V K+Y+L++A    +   R  +E+I  
Sbjct: 112 IVKFLRGRGFFITGATGFLAKDSTDRT-----DVGKIYVLIKAKSKEAAMARLKSEIINA 166

Query: 66  DLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNFAATTR 125
           +LF+ +++  G +  + +  K+  V G++   +LG ++  L   + ND+D I+N AA T 
Sbjct: 167 ELFKSLQQTYGKSYQAFMLSKLVPVVGNICESNLGLEED-LTNLIANDVDVIVNSAANTT 225

Query: 126 FDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQLG---- 181
           FDERYDVA+  NT GA +++ FAK C  LKL + VSTAYV G+  G IMEK + +G    
Sbjct: 226 FDERYDVAVDINTRGACHLMNFAKKCQNLKLFLQVSTAYVNGQRQGRIMEKTFCIGDCIA 285

Query: 182 ------EALNGVLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIER 227
                 E+ +G L L I++ +  +   LN   ++G  E+ + + M  +G+ER
Sbjct: 286 KENFISESTSGSL-LPILDVEYEMKLALN--SKDGLQESEVAQEMKRLGLER 334


>28902.m000037 Male sterility protein, putative
          Length = 442

 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 100/178 (56%), Gaps = 17/178 (9%)

Query: 61  EVIGKDLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNF 120
           E+I  D+F+ +K+K G +  + +  K+  V G++   DLG  ++++   +  ++  I+N 
Sbjct: 7   EIINADVFKCLKQKYGQSYQNFMLSKLVPVVGNICESDLGL-EATMANVISREVHVIINS 65

Query: 121 AATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQL 180
           AA TRF+ERYDV++ TNT G  +++ FAK C  L L + +S+AY  G   G+IMEK + +
Sbjct: 66  AANTRFNERYDVSIDTNTRGTYHLMNFAKYCKNLSLFLQISSAYANGPRKGIIMEKKFSM 125

Query: 181 GEALNGVLG-----------LNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIER 227
           G+ + G              LN+ +E +L    ++  Q    T+ N+KK    +G+ER
Sbjct: 126 GDTITGEKSNSENRSTSLPILNVEKEIQLAFDAIDTFQDNSLTQ-NLKK----LGLER 178


>41482.m000013 conserved hypothetical protein
          Length = 152

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 77/124 (62%), Gaps = 1/124 (0%)

Query: 6   ITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYNEVIGK 65
           I  FL+ KT+L+TGATGFL  V +EK+LR   ++ KLYLL++A +  +  +R  +E+I  
Sbjct: 30  IVSFLQGKTLLITGATGFLGMVLVEKILRSVADIDKLYLLIKARNKEAAMERLNSEIIDA 89

Query: 66  DLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNFAATTR 125
           D+F+ +K+K G +    +  K+  V G+    DLG  ++++ + +   +  I+N AA T 
Sbjct: 90  DVFKCLKQKYGQSYQQFMLSKLVPVVGNTCESDLGL-ETTMADVISRQVHVIINSAANTT 148

Query: 126 FDER 129
           F+ER
Sbjct: 149 FNER 152


>30029.m000017 conserved hypothetical protein
          Length = 285

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 18/130 (13%)

Query: 109 EMINDLDFILNFAATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGE 168
           E+I  L  I  +   + +  RYDV++ TNT G  +++ FAK C  L L + +STAYV G 
Sbjct: 109 ELIRQLATI--YKPYSFYKGRYDVSIDTNTRGTSHLMNFAKYCKNLSLFLQISTAYVNGP 166

Query: 169 SSGLIMEKPYQLGEALNG-----------VLGLNIVEEKKLIDRKLNQLQREGATEANIK 217
             G+IMEK + +G+ + G           +  LN+ +E +L    ++  Q    T+ N+K
Sbjct: 167 RKGIIMEKKFSMGDTITGEKFNSENLSTSLPILNVEKEIQLAFDAIDTFQDNSLTQ-NLK 225

Query: 218 KAMIDMGIER 227
           K    +G+ER
Sbjct: 226 K----LGLER 231