Jatropha Genome Database

JcCB0219281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0219281.10 + phase: 0 /partial
         (147 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014100 Vacuolar protein sorting, putative                      292   3e-80
29736.m002018 Vacuolar protein sorting, putative                      277   1e-75

>30147.m014100 Vacuolar protein sorting, putative
          Length = 191

 Score =  292 bits (748), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 140/147 (95%), Positives = 142/147 (96%)

Query: 1   EVHDYLKTLCPDLHITRGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 60
           EVHDYLKTLCPDLHI RGEYDEE RYPETKTLTIGQFKLGLCHGHQV+PWGDLDSLAMLQ
Sbjct: 45  EVHDYLKTLCPDLHIARGEYDEETRYPETKTLTIGQFKLGLCHGHQVVPWGDLDSLAMLQ 104

Query: 61  RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY 120
           RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY
Sbjct: 105 RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY 164

Query: 121 VYELIDGEVKVDKIDFKKTSTTPHAAH 147
           VYELIDGEVKVDKIDFKK S T H+AH
Sbjct: 165 VYELIDGEVKVDKIDFKKASATTHSAH 191


>29736.m002018 Vacuolar protein sorting, putative
          Length = 188

 Score =  277 bits (709), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 133/142 (93%), Positives = 138/142 (97%)

Query: 1   EVHDYLKTLCPDLHITRGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 60
           EVHDYLK+LCPDLHITRGEYDE+  YPETKTLTIGQFKLG+CHGHQVIPWGDLDSLAMLQ
Sbjct: 45  EVHDYLKSLCPDLHITRGEYDEDSCYPETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQ 104

Query: 61  RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY 120
           RQLDVDILVTGHTHQF AYKHEGGVVINPGSATGAYSS TYDVNPSFVLMD+DGLRVVVY
Sbjct: 105 RQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFTYDVNPSFVLMDVDGLRVVVY 164

Query: 121 VYELIDGEVKVDKIDFKKTSTT 142
           VYELIDGEVKVDKIDFKKT+TT
Sbjct: 165 VYELIDGEVKVDKIDFKKTATT 186