Jatropha Genome Database

JcCB0218961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0218961.10 + phase: 2 /partial
         (699 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013852 conserved hypothetical protein                          724   0.0  
30147.m013851 conserved hypothetical protein                          320   1e-87
29792.m000614 Cysteine desulfuration protein sufE, putative           177   1e-44
30154.m001143 UV-induced protein uvi31, putative                       83   5e-16

>30147.m013852 conserved hypothetical protein
          Length = 440

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/440 (80%), Positives = 380/440 (86%), Gaps = 23/440 (5%)

Query: 275 MDPEVQGVLTAAQKLWPHIHISDSLVMADSAVKMAKAGCKFITVLGVDFMSENVRAILDQ 334
           MDPEVQGVLTAAQK WPHI ISDSLVMAD AVKMA+AGCK+ITVLGVDFMSENVRAILDQ
Sbjct: 1   MDPEVQGVLTAAQKQWPHIQISDSLVMADKAVKMAQAGCKYITVLGVDFMSENVRAILDQ 60

Query: 335 AGFGEVGVYRMSRERIGCSLADAASSPAYMNYLEAASGSPHSLHVVYINTSLETKAYAHE 394
           AGFGEVGVYRMS ERIGCSLADAASSP YM+YLEAASGS +SLHVVYINTSLETKA+AHE
Sbjct: 61  AGFGEVGVYRMSNERIGCSLADAASSPDYMSYLEAASGSTNSLHVVYINTSLETKAFAHE 120

Query: 395 LVPTITCTSSNVVQTILQAFAQIPDLNVWYGPDSYMGANIAKLFQQMTVMTDDEIAE--- 451
           +VPT+TCTSSNVVQTILQA+AQIPDLNVWYGPDSYMGANIAKLFQQMT+MTDDEIAE   
Sbjct: 121 IVPTVTCTSSNVVQTILQAYAQIPDLNVWYGPDSYMGANIAKLFQQMTMMTDDEIAEVHP 180

Query: 452 ------------------DGTCIVHHLFGNEVVEKINEMYCDAFLTAHLEVPGEMFSLAM 493
                             DGTCIVHHLFG+EVVEKINEMYCDAFLTAHLEVPGEMFSLAM
Sbjct: 181 AHSRESIKAVLPRLHYYQDGTCIVHHLFGHEVVEKINEMYCDAFLTAHLEVPGEMFSLAM 240

Query: 494 EAKRRGMGVVGSTQNILDFIKQRVQEALDRNVNDHLQFVLGTESGMITSIVAAVQHLLGS 553
           EAKRRGMGVVGSTQNILDFIK RVQEALDRNV+DHLQFVLGTESGMIT+IVAAVQ L  S
Sbjct: 241 EAKRRGMGVVGSTQNILDFIKHRVQEALDRNVDDHLQFVLGTESGMITAIVAAVQQLFRS 300

Query: 554 AGSSAGAKINVEIVFPVXXXXXXXXXXXXXXXXXXXXAGDFALPVVPGVASGEGCSLHGG 613
           A SS  AKINVEIVFPV                    AG+F LPVVPGVASGEGCS+HGG
Sbjct: 301 AKSSGEAKINVEIVFPV--STDSITKTPPSPGVESGKAGEFELPVVPGVASGEGCSIHGG 358

Query: 614 CASCPYMKMNSLDSLLKVCEHLPDEKNVIAEYEAERFKLQTPSGKSIADVGCEPILHMRH 673
           CASCPYMKMNSL++LLKVC+HLPDE+N+IA Y+A+R+K QTPSGKSIA+VGCEPILHMRH
Sbjct: 359 CASCPYMKMNSLNALLKVCQHLPDEENIIAAYKADRYKRQTPSGKSIAEVGCEPILHMRH 418

Query: 674 FQMTKEMPEKLVNEVLLSNG 693
           FQ TKE+PEKLVN+VL  +G
Sbjct: 419 FQTTKELPEKLVNQVLTGSG 438


>30147.m013851 conserved hypothetical protein
          Length = 272

 Score =  320 bits (820), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 164/233 (70%), Positives = 190/233 (81%), Gaps = 1/233 (0%)

Query: 19  NCTPKRRLFPHET-QYSSFSFKSLKCIPSDSVPNSPTNPNISRFSCSAVTFSPSPPAEFV 77
           N +P+RRLF ++T +  SF FKS+KC    + P   +    S  + ++ + S SP +E V
Sbjct: 27  NPSPRRRLFSYKTAKCPSFFFKSIKCSVHSNNPKRSSPDLFSCSAITSSSSSSSPTSELV 86

Query: 78  PDKLLHLITEFQSITEPINRVKRVIHYASLLAPFPESSRVDSNRVMGCTARVWLDAQLDR 137
             KL +LITEFQS  E ++R+KRV+HYAS + PFP+SSRVDSNRVMGCT+RVWLDAQLD 
Sbjct: 87  AVKLQNLITEFQSFPESVDRLKRVLHYASTIPPFPDSSRVDSNRVMGCTSRVWLDAQLDN 146

Query: 138 YGKMRFLADSDSEITRGFCACLLSVLDGAAPEEVLSVKTENLAALNVGLPGGERSRVNTW 197
           YGKMRFLADSDS++TRGFCACLLSVLDGAAPEEVLSV TE+LAALNVGLPGGERSRVNTW
Sbjct: 147 YGKMRFLADSDSDVTRGFCACLLSVLDGAAPEEVLSVTTEDLAALNVGLPGGERSRVNTW 206

Query: 198 HNVLVSMQKRTRKLVAEREGKQLVDPFPSLAVTSEGIQAKGSYAEAQARYLYP 250
           HNVLVSMQKRT+KLVAEREGKQ  DPFPSL + SEGIQAKGSYAEAQA Y  P
Sbjct: 207 HNVLVSMQKRTKKLVAEREGKQPFDPFPSLIINSEGIQAKGSYAEAQASYYIP 259


>29792.m000614 Cysteine desulfuration protein sufE, putative
          Length = 231

 Score =  177 bits (449), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 86/169 (50%), Positives = 123/169 (72%), Gaps = 10/169 (5%)

Query: 80  KLLHLITEFQSITEPINRVKRVIHYASLLAPFPESSRVDSNRVMGCTARVWLDAQLDRYG 139
           +L  L++EF+S+TEPI+RVKR++ YA+ L PF ES+R   NRV GCT +VWL+ ++D  G
Sbjct: 27  RLERLVSEFESLTEPIDRVKRLLDYAARLPPFDESARSPGNRVTGCTTQVWLEVRIDEKG 86

Query: 140 KMRFLADSDSEITRGFCACLLSVLDGAAPEEVLSVKTENLAALNVGLPGGERSRVNTWHN 199
           ++RF  DSDSEIT+GF +CL+S+LDG  P+EV+SVK E+LAA+NVG+ G  +SR+NTW+N
Sbjct: 87  RVRFRGDSDSEITKGFISCLISLLDGLEPDEVVSVKAEDLAAMNVGIYGKAQSRINTWNN 146

Query: 200 VLVSMQKRTRKLVAEREGKQLVDPFPSLAVTSEGIQAKGSYAEAQARYL 248
           VL++M  RT  LVAE++        P LA T+    A  S+ ++Q  +L
Sbjct: 147 VLINMHNRTLALVAEQKRN------PPLAFTN----ANASFPQSQKIFL 185


>30154.m001143 UV-induced protein uvi31, putative
          Length = 304

 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 3/140 (2%)

Query: 73  PAEFVPDKLLHLITEFQSITEPINRVKRVIHYASLLAPFPESSRVDSNRVMGCTARVWLD 132
           P E +P KL  ++  FQS+ EP  + ++++ Y   L P     +   N+V GC ++VW+ 
Sbjct: 5   PIEELPPKLREIVKLFQSVQEPKAKYEQLLFYGKNLTPLDTQFKTRENKVEGCVSQVWVR 64

Query: 133 AQLDRYGKMRFLADSDSEITRGFCACLLSVLDGAAPEEVLSVKTENLAALNVGLPGG-ER 191
           A LD+   + F ADSDS +T+G  A L+  L G   +EVL V + + A L +GL      
Sbjct: 65  AYLDKEKNVVFEADSDSVLTKGLAALLVQGLSGRPVDEVLKV-SPDFAVL-LGLQQSLTP 122

Query: 192 SRVNTWHNVLVSMQKRTRKL 211
           SR N + N+L  MQK+  +L
Sbjct: 123 SRNNGFLNMLKLMQKKALEL 142